Nipponia nippon (crested ibis): 104012821
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Entry
104012821 CDS
T05756
Symbol
SHFM1
Name
(RefSeq) 26S proteasome complex subunit DSS1
KO
K10881
26 proteasome complex subunit DSS1
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03050
Proteasome
nni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
104012821 (SHFM1)
09124 Replication and repair
03440 Homologous recombination
104012821 (SHFM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104012821 (SHFM1)
04131 Membrane trafficking [BR:
nni04131
]
104012821 (SHFM1)
03051 Proteasome [BR:
nni03051
]
104012821 (SHFM1)
03400 DNA repair and recombination proteins [BR:
nni03400
]
104012821 (SHFM1)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
104012821 (SHFM1)
Membrane trafficking [BR:
nni04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
104012821 (SHFM1)
Proteasome [BR:
nni03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
104012821 (SHFM1)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104012821 (SHFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
104012821
NCBI-ProteinID:
XP_009463503
LinkDB
All DBs
Position
Unknown
AA seq
81 aa
AA seq
DB search
MGLGPPKGLSIINCITKFLDAVMLCGIRRCLFSVEENWTGLDEDEDAHVWEDNWDDDNVE
DDFSNQLRAELEKHGYKMETS
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggggctaggtccaccaaaaggcttgagtattataaactgcatcaccaaatttttagat
gctgtgatgctttgtggaattcgaagatgtcttttctcggtggaggaaaactggactggt
ttagatgaagatgaagatgcgcatgtctgggaagacaattgggatgatgacaatgtggaa
gatgatttctccaatcagttaagagcggaattagaaaaacatggatacaagatggaaacc
tcatag
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integrated database retrieval system