Nipponia nippon (crested ibis): 104016345
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Entry
104016345 CDS
T05756
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104016345 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104016345
NCBI-ProteinID:
XP_009467479
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MKPFEKSWLFLLLPAVLRVVCSSFISVNLGVKVMKGQSVFLSEDVLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEIPEYYGLSRVIDKNVLAFDYDRKINLDCTISIASSETH
LPAHGQLITGEVQREQLRGDQPQSFFPGPKHSLGQQCRNGSCTPGLGVVQNTKMSCEEFL
RMGIRYQHLDPPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVQIKGAIPNQMPKAAPMA
KFILEVDQFILTPITTTTIDAEDNETPKSLLVFNITKPPPQGFITHLSDHTKAVGSFTWK
DLSDMLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGQLTVRGEKGFMFTVSDIQAGVV
HYHHDDSDSTKDFVVFRIFDGPHSTRHKFPINILPKDDSPPFLISNMVIEVHEGQTILIQ
GSMLHASDMDSSDDYILFNITKHPQAGEIMKKPGPNLIGYSVSSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEIAHL
TKKHLHFIDVEEQDRELTYTITTSPFFSCMHGHADAGKLFMVDTIPKLVKDPAALALRSF
TQHAVNYMKVAYMPPLQDIGPEPQQVQFVFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TSHLRVEEGGLSPVTEGHILISDVDTKREHVLLLLQRQPQHGAVELDGIPMNEGDRLSCE
DLHTLAVRYRHDGSETLTDDVLFAATDGIHFVEFILQVKVLPVNDEPPVMQTGLVPVLHC
LEGEEVVLSSEYIYATDADSDNMKLMFMLAHQPYHGVVRKAGVAVDRFSQADVISGLVTY
KHTGGEIGLTPSIEILTFVVSDGEAGLDVKDCCYDGPLPPPVPVHDPFPVYDLNITVLPV
DNQPPSVATGAKFVVEEGSSAALTTNHLFATDPDTTADDLEFVLVSPPQFGYIENVLPSP
GFEKSNIGISIASFQLKHLKALNINYVQARHMRMEPTADHFVLYVTDGLHRSAETPFFVL
INPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPQDHLVFGVVQRPWYGFLINGV
HGNDILHYKQLINHDHHSHGLLVHDFSMELLKNGMKLMYMHDNSENLTDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKDDIEVNMGETRIISSAVLLAEDKDTPREGIYYLFERL
PENGQLQLKVGQGWMTLQTGMKCTQEELDMNLVRYVHTGAIGSKNQDSFTFYLWDGYNRS
PAVDFYINIKDMEKGDIAVFIKPLRVPKGDQGYITTDVLLALDGTDKPEELLYVITSPPQ
YGQIEYVSYPGIPITSFSQMDIARQIVCYVHNTKAVVPEDTFRFIISNGLRTKHGTFMIS
LEAVDQALPTLSRNTGLRLVEGAMALLSSDVLQLSDPDTAKENLTFLLAQLPQYGHLYYQ
GAVLLQYNFTQQDVDNRDVAYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTI
QVDHLDKMAPKIIHLHCSSDVELLNNGNYGIYITARSLKASDPNTEDDKIIFKILRGPHY
GYLENITTGGFIQEGFSQKDLNSKIILYVINPSREVNSDDLEFQVTDASGNSAVPQRLEL
RWSRIEMQQTEYEVCESVGVVSLKITRAGHSAESAFIAVKVNEISAILGKDFTVTPSKLV
QFDPGMNQCTE
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggttgtttttactgctgcctgctgtactgagagttgta
tgctcctcctttattagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgtcctcaaattttcgattcccagagagaaggatgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccgcaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccataatggctgtccaattttagacgaa
gacacagtcatgcttaggctgtacaggtttacagaaactgaaacgtttgtagaaacattc
accctccatgtgcagttacttgagccagactgtaacatcatcaaaatgcgctcccatgcc
ctggagatccctgagtactatggtctgtccagagtgattgacaagaacgtcctcgctttt
gactatgacaggaagataaatctggactgcaccatttccatcgcctcttcagaaacccac
ctgcctgctcacggccagctcatcactggggaagtgcagcgagagcagcttcgtggagat
cagccacagagcttcttccctggccctaagcacagtctgggccagcagtgcagaaatggg
agctgcacgccaggactgggagttgttcagaacacaaaaatgagctgcgaagaatttctg
aggatggggattcgatatcagcaccttgaccctccctctcctgacaccgattatattcct
gtgaggctggatctcacagacagcagaagcaaaactctgcacaagactgagtatgcatgg
ctccctgttcagattaaaggcgctattcccaatcaaatgcccaaagctgccccgatggca
aagttcatcctggaagtagatcaatttattttaacccccattacaaccacaaccattgat
gctgaagacaatgaaactccaaagtccctgcttgtattcaacatcaccaagccacctcca
cagggctttatcactcatctatccgaccatacaaaagctgttggctccttcacctggaaa
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagagaagg
aattatgaggtggagtttgaggttcatgatttctactttgaaaggagtttaccgatcact
gtgcatctttctatcagaacaacagatacaaacgctcctcgggtttcatggaacacaggc
ctcaacctcctggaagggcaatcccgaccgatcacatggcaacacttccaaattgtagac
aacgatgacatccaaaatgttcgcttggtcacagttgacggcttacagcatgggcagctc
acagtgagaggagagaaaggattcatgttcacagtctctgacattcaagctggagttgtt
cactaccatcatgatgacagtgattctactaaggactttgtggtgtttaggatttttgat
ggcccccacagtactcgccataagtttccaatcaatatcctccctaaagatgacagccct
ccatttcttatcagcaatatggtcattgaagttcatgagggacagacgatcctgattcag
ggctccatgcttcatgcttctgacatggattccagtgatgattacatactattcaatatt
accaagcacccacaagctggagaaatcatgaagaaaccaggaccaaacctgatagggtat
tctgtcagcagttttcttcagagggatctatttaatggaataatttattatcatcatttg
ggaggagaagtatttgaagattcccttgagtttgtgctatgtgatagccatgaccctccc
aatctctcagagccacaggtgatgatggtgcacattatccctgtggacgatcagctaccc
agagaagccccaggagtgacgcgtcacctggttgttaaggagactgagattgctcaccta
actaagaaacatctccacttcatagatgtggaagaacaagacagggaactcacatacacc
ataaccacttccccatttttctcttgcatgcacggccatgcagatgctgggaagctgttt
atggtagacaccatccccaagctggtcaaggatcctgctgctcttgcactgcggtcattt
acgcagcatgctgtgaactatatgaaagttgcttacatgccaccactgcaggacatcggg
cctgaaccgcagcaagtccagtttgttttttccgtcagcaatcagcatggtggcactttg
tatgggatctgcttcaatattacaattcttcctgtggacaatcaagcgccagaggttttt
acaagccatttgagagtggaagagggtggcctgagccctgtcacagagggacacattctc
atctctgatgtggacacgaaacgggagcatgtcctcctcctcctgcagagacagcctcag
cacggggcagtggagctggatggcattcccatgaacgaaggcgacaggctttcctgtgag
gacctgcataccctggcagtcaggtatcggcatgatggctctgagactctcactgacgat
gtcctctttgcagccacagatggcatccactttgtagagttcatcctgcaggtcaaggtg
ttgcctgtgaatgacgagccacctgttatgcaaacaggccttgttcctgtgctccactgc
ctggaaggtgaagaagtggtcctctcctcggagtacatttatgccacagacgcagacagt
gataacatgaaactgatgtttatgctggctcaccagccctaccacggggtagtgaggaaa
gctggtgttgctgtggatcgtttctcccaagctgatgtcatctctggtttagtcacatat
aagcacactggtggggagattggcctgactccttccattgagatcttaacctttgttgtc
tctgacggtgaggctggcctagatgtgaaagactgctgttatgatggacctcttcctcct
ccagttccggttcacgatccatttccagtatatgaccttaacatcactgtacttccagta
gacaaccagcctccatcagttgcaactggtgcaaagtttgtggtggaggagggctcctca
gcagcccttaccaccaaccatttgtttgccactgaccctgacaccactgcagatgactta
gagtttgtcttggtttctcctccccagtttggttacattgaaaatgtactgccttcccct
gggtttgagaagagcaacattggtataagtatagcttcgtttcagctgaagcacctgaaa
gccctgaacataaactatgtacaagccaggcacatgcgtatggagccaacagcagaccac
tttgtactttatgtcactgatgggctgcatcgctcagcagagactccattttttgtgctg
atcaacccgaccaatgatgaagtcccagaattcatagcaaggaatattaccgttcaagag
ggggagatgaaagagctggatctctctgttatcaatgcagttgatctggatgtgcctcaa
gaccatttggtatttggggttgtgcagaggccctggtatgggttccttattaatggagtt
catggcaatgatattctacactataaacagttaattaaccatgaccaccacagccatggg
ttgcttgttcatgacttttccatggagctactgaagaatggaatgaagctgatgtacatg
catgacaattcggaaaacctcactgacagctttaaaattcagctatcagatgggaaacat
aaagtcctcagaaccatttcagtaaaggtcattccagttaatgacgagaaaccagtgctg
agcaagaaggatgatatagaggtgaacatgggtgaaacgcgaataatttctagtgctgtt
ctgttggcagaagataaagatacccccagggagggaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggccaaggctggatgactctccaaactgga
atgaagtgcactcaggaagaactggatatgaaccttgtgagatacgtccatacaggagct
atagggtccaagaaccaagacagcttcacattttatctgtgggacgggtacaacagatcc
ccagctgtggacttctacataaatatcaaggacatggaaaagggagacattgctgttttc
ataaaacctcttagagtgccaaaaggggatcagggctacattacaactgatgtccttctt
gcactggatggtactgacaagccagaggagctcctctatgtcataacctccccaccccag
tatggacaaatagagtatgtcagctatcctggcatccccattacgagcttcagtcaaatg
gacatagcaagacagatagtctgctatgttcacaacacaaaggcagttgttcctgaagat
acattcagattcatcatcagcaatggactgaggactaagcatgggacattcatgatctcc
ttggaggcagtcgaccaagctttgcccacactatctaggaacacagggttaagattagtg
gaaggcgctatggcactcctttcttctgatgtcctgcagctttcagacccagacactgcc
aaagaaaaccttaccttcctcttggctcagctcccccaatacggtcatctctattatcaa
ggggctgtgctactgcagtacaatttcacccagcaagatgtggacaacagggatgttgca
tacaagcaccgaggtggggattcccagattgacagatttacatttgttgcaacagatagg
actaaccaaggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccatt
caggtggatcatttggacaaaatggcaccaaaaattattcatctccattgctcttctgat
gtggaactgctgaataatggcaattacgggatctatattactgccaggtccctgaaggca
tctgaccccaatacagaagatgacaaaataatttttaagattttacgaggtcctcattat
ggctacctggaaaatataacaacaggtggatttattcaggaagggtttagccaaaaggat
ttaaacagcaaaatcatactttatgtcatcaatccatcgcgggaagtgaattcagacgac
ttggagtttcaagtcacagatgccagtggcaactccgcggtgccccaaaggctggagcta
cggtggtctcggattgaaatgcaacagactgaatatgaagtgtgtgagagcgtgggagtg
gtgtctctgaaaatcaccagggcagggcactctgcagagtccgcgtttattgcagtgaag
gtcaacgaaatatctgctatactgggaaaggactttacagtgactccctccaagcttgtt
cagtttgatccaggtatgaaccagtgcactgaataa
DBGET
integrated database retrieval system
