Nipponia nippon (crested ibis): 104019361
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Entry
104019361 CDS
T05756
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03013
Nucleocytoplasmic transport
nni03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104019361 (UPF3A)
03015 mRNA surveillance pathway
104019361 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104019361 (UPF3A)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104019361 (UPF3A)
mRNA cycle factors
P-body specific factors
104019361 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104019361
NCBI-ProteinID:
XP_009470889
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLF
RDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCAD
EEKIYANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK
RLREEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKGEEADI
EENKWDKSPGSGSIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDG
RKHRAHYEFDKFVRRNEEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASK
KERIRNKDRPAMQLYQPGARIRTHTGSTSKTYDCSGKSFEDALDKKYEADNSAGGGSEKS
EEAE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagttattcgacggcttcctccttgtctaactaaggagcaactggaggaacag
ctacatcctctacctgcccatgattattttgagttttgcactgctgatcccagcctttat
cctcatctctactcaagagcatacattaactttagaaatcctgaggacatccttcttttt
agagatcgctttgatggctatgtcttcattgataataaaggtttggagtaccctgcagtg
gttgaatttgctccattccagaagatttcaaaaaagaagctgaagaagaaagatgccaaa
gctgggagcatcgaagacgatccagaatacaggaagtttttagagagttattgtgctgat
gaagagaaaatctatgccaatcctgagattcttttgggagagattgaggccaaaacaagg
gaactcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaa
aagcagagaatacgagaagagaaaagagaagaacgaaggcggagagaattggagaagaaa
cgtttgcgggaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaagaaaagaa
gtggagaagcaaaagaagatttccgaaaaagaaataaggatcaagcttcttaagaagcct
gaaaaaggagatgagctggccagtgaaaagcacaaagaaaaaggtgaagaagctgacatt
gaagaaaacaaatgggataaatcacctggatctgggagtataaaatccaaatcattggag
ggttcactaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagat
ttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggatgatggc
agaaagcatagagctcactatgagtttgacaagtttgtgagaaggaatgaagaagagctg
aagtgggggaaaggatacaaccaagacagaggaaagaaagggaactacaactacagcttc
actgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaa
aaggagcgcataagaaataaggatcgcccagccatgcagttataccagccaggagctcgc
attcgaacacatacgggatctacaagtaaaacctatgactgcagtgggaaatcctttgaa
gatgctcttgataaaaagtatgaggcagataattcagctggaggtggttctgagaagagc
gaggaagcagaataa
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