Nipponia nippon (crested ibis): 104020010
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Entry
104020010 CDS
T05756
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03250
Viral life cycle - HIV-1
nni04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104020010 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104020010 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nni03400
]
104020010 (SAMHD1)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104020010 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
104020010
NCBI-ProteinID:
XP_009471648
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSFGSAFMEADVCDRAGIWDDDRALLVLLSSLPSERLKVLACLNNLRQQHMDVMKVFNDP
IHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYLVFPGASHNRFEHSIGVGYLAGCLVRA
LKERQPELDITQRDILCVEIAGLCHDLGHGPFSHMFDGRFVPLTRPDLKWKHETASVEMF
EHLITSNKLEEVMKSYGLVLEEDMNFIKEQIGGPIDEAACEKSWPYRGRQKEKSFLYEIV
ANKKNGIDVDKWDYFARDCHHLGIQNNFDYKRLLKFIRVCEVRNQKHICTRDKEVGNLYD
MFHTRNCLHRRAYQHKIGNIIEIMITEAFQKADKFFKIEGSGGKLYQISTAMEDMEAYTK
LTDNIYLEILHSSCPELKEAREILRKIERRELYKFLGETQPETKREIVKSNSLAESIANS
KPEKDPPDVELKAEDFIVDVINMDYGMKEQNPIDKVLFYCKADPSKAVKISKEQVSKLLP
MTFAEQVIRVYCKSQDPKVVSAAKQYFIQWCIEKDFTKPQDSDVVAPHLTPMKRSWNNVG
DDEHRTASEPSCRQRLPFDK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgggagcgccttcatggaggctgacgtgtgtgaccgagctgggatttgggat
gatgaccgggccttgctggtgctgctttccagcctcccatctgagagactgaaagtgctg
gcctgcctgaacaacctgcgccagcagcacatggatgtgatgaaggtttttaatgatccg
attcatgggcacattgaaatacatccccttcttgtccgtatcatcgacacgcctcagttc
cagcgtctccgatacatcaagcagctgggcggcacttacttagtgtttccaggagcctct
cacaaccgctttgagcactctataggggtgggctacctagcaggatgtctggttcgtgca
ctgaaggagagacaaccagaactggatataacccagcgagatatcctctgtgtagaaatt
gctgggctttgtcatgatttgggtcatgggccattttcacacatgtttgatggaagattt
gttccactcactcgtccagatttgaagtggaagcacgaaactgcctctgttgaaatgttt
gagcacctgatcacttccaataaactagaagaagtcatgaagtcgtatggtcttgtcctg
gaagaagatatgaacttcatcaaggaacaaataggagggcctatagatgaagccgcttgt
gagaaatcgtggccctaccgtggtcgacaaaaggagaaaagtttcctatatgaaatagta
gctaacaaaaaaaatggcattgacgttgacaaatgggattattttgcaagggattgccat
cacctaggaatccagaataattttgattataagcgattacttaaattcattcgggtctgt
gaagtaagaaaccagaagcatatctgtacccgtgacaaggaagttggaaatttgtatgat
atgttccacacacggaattgcctgcaccggcgagcataccagcataagattggcaacatc
attgaaataatgattacggaagcctttcaaaaagcagacaaattttttaaaatagaaggc
tctggaggaaaactgtaccagatttctacagcaatggaggacatggaagcctacactaag
ctaactgataatatctacctggaaattctgcactcaagttgtccggaactgaaggaggca
cgagaaattttgcgtaaaatagaacgacgtgaattatacaagtttttaggagagactcaa
ccggaaacgaagagggaaatcgtaaagagtaatagcctggcggaaagcattgctaattcc
aagccagaaaaggatcctccagatgtggagctaaaggctgaagatttcatagttgatgtt
atcaatatggattatggaatgaaagaacagaatcccattgataaagttctcttctattgc
aaggctgatccttccaaggcagtcaagatcagtaaagaacaggtttcaaagcttttgccc
atgacgtttgcagaacaggttatccgggtttactgtaaaagtcaggatccaaaagttgtt
tcagctgcaaaacagtattttattcagtggtgtatagagaaggatttcaccaaaccccag
gatagtgatgtggttgcccctcatctaaccccaatgaagagaagctggaataacgtggga
gatgatgaacacaggacagcttcagaacccagctgcagacaaaggcttccttttgataag
taa
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