Nipponia nippon (crested ibis): 104023101
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Entry
104023101 CDS
T05756
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nni03037
]
104023101 (IFT88)
Cilium and associated proteins [BR:
nni03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
104023101 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_8
TPR_14
TPR_6
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
SNAP
TPR_9
TPR-S
TPR_15
TPR_21
DUF6584
Coatomer_E
DUF2989
FumaraseC_C
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
104023101
NCBI-ProteinID:
XP_009475157
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MFHRKMMQNVHLAPEADEDDLYSGYNDYNPTFDTEDLENDVAFQQAARTSHGRRPTVTDK
IPGTSASRTLVTGFGSKATLTSSMGRPMTGAIQDGVARPMTAVHAAGYTKAAMRGSSFDP
LGQARGPAPPLEMKNSDSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKE
RVLVRQREQIATPENINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFSNGGRL
KVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGIAFIKTGQYVDAISSF
EHIMSTSPNLKAGFNLILCYFAIGNSEQMKKAFQKLIAVPLEVDYDDKYISPNDDPHTNL
LIEAIKNDSLRQIERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELA
NDLALETLKMFEKKDSRVKSAAATNLSFLYYLENELTQATNYADLAVNSDRYNPAALTNK
GNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRIDEALDCFLKLHAILRN
SAQVLHQIANIYEIMEDPSQAIEWLLQLISIVPTDPHVLSKLGKLYDNEGDKSQAFHYYY
ESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNY
QKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYMTKLKKVEKLKEIREQRIKSG
RDGSARSRREANAGGDSMRTYSGGTKGERLSAKLKALPGASEPYESSGSKEIDASYVDPL
GPQAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacagaaaaatgatgcaaaatgtgcatctggctcctgaggctgatgaagatgat
ctttattctggctacaatgattataatcccacatttgacacagaggatttagaaaatgat
gtagcttttcaacaggcagcaagaacaagtcatggtagaagacccactgtgacagacaaa
attcctggtacatcagcttcaagaactttagttactggatttgggtcaaaggcaacttta
acttcatctatgggaagaccaatgacaggagctatacaggatggggttgctcgaccaatg
acagcagtgcatgctgcaggttacactaaggcagctatgagaggttcttcatttgatcct
cttggccaagcaagaggtcctgctccacctctggaaatgaaaaattcagacagttcagaa
gagaagattaggcagttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgcc
aacagctgtggagacttgaaattggctctggaaaaagcaaaagaggctggaagaaaggag
agagtattggtgagacaacgtgaacaaattgctactccagaaaacatcaacttagacctc
acttactcagtcctttttaatctggccagtcagtatgctgctaatgaaatgtatgctgaa
gcactgaatacttatcaagttatagtgaagaataagatgttcagcaatggaggtagactg
aaggtgaatatgggaaatatatatttaaaacaacggaactattccaaagctatcaagttc
taccgtatggctctagaccagattcctagcgtccacaaagagatgaggattaaaataatg
caaaatatcggaattgcatttattaaaactggccaatacgttgatgccatttcttcattt
gaacatataatgagcacgtctccaaacctgaaggcaggcttcaacttgatcctatgttat
tttgctattggaaacagtgagcaaatgaaaaaagccttccaaaaactgattgcagttccc
ttggaagtggattatgatgacaaatacatttcaccaaatgatgatccacatacaaatcta
ctgattgaagccattaaaaatgacagcttaagacaaatagaacgtgagaggaaatctatg
gcagaggaatacatcatgacagctgctaaactcattgcgccagtaattgagacatctttt
gcagtgggctatgactggtgtgttgaagtagtaaaagcttcacactatgtagagttagcc
aatgacctggcactggaaactttaaaaatgtttgaaaaaaaggatagcagagtaaagagt
gcagctgcaacaaacctttcattcctttattatttggagaatgaattgacacaagcaact
aactatgcagatttagctgtaaattctgataggtacaatccagcagctctaactaacaaa
ggaaatactgtttttgcaaatggagactatgaaaaagcagctgagttttataaggaagct
ctcaggaatgattcctcatgcactgaagcactttataatcttggtttaacatacaagaag
ttaaacagaatagatgaagctttggattgttttctgaaactccatgcaatccttcgaaat
agtgcccaagtccttcaccagatagcaaacatatatgagatcatggaagatcccagtcaa
gccatagagtggctcctgcagttgatcagtatagtaccaactgatccacatgtactttca
aagctagggaaattatatgataatgaaggtgataaatcccaggcttttcattattactat
gagtcgtaccggtatttcccttcaaacattgaggtcattgaatggcttggagcctattac
attgacactcagttttgtgaaaaagccattgagtactttgaaagagcagcacttatccta
ccgacacaagtgaagtggcagctgatggttgccagttgctacaggagaagcggtaactac
cagaaagctctagagaaatacaaagtaattcacagaaaattcccagagaatgttgaatgc
ctccgatttttagttcgtctctgcacagatatggggctgaaggaagtccaggaatatatg
acaaagctcaagaaagtggaaaaattaaaagaaataagagagcagcgcattaaatctggc
agagatggcagtgcacgtagccgcagagaagcaaatgctggtggcgacagcatgcggacc
tatagtggtggtaccaaaggggaaagactgagtgccaaactaaaagctttgcctggagca
agtgaaccctatgaaagtagcggcagcaaagaaatagatgcctcctacgtagatccactt
ggcccgcaagcagaaagaccaaaaactgcagcaagaaaaagaactgaggaagatgacttt
gctgatgaagaactaggagaggatttgcttccagaatag
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