Nestor notabilis (Kea): 104404939
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Entry
104404939 CDS
T08494
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nnt03000
]
104404939 (RC3H2)
04121 Ubiquitin system [BR:
nnt04121
]
104404939 (RC3H2)
Transcription factors [BR:
nnt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104404939 (RC3H2)
Ubiquitin system [BR:
nnt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104404939 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104404939
NCBI-ProteinID:
XP_010011793
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYEEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSENVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGTDYSEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQDDQLLNGTTVENGHLLKQHQKESLEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITSVSNASCLPISTAVSVGSLILKTAHIMSEDKNDFLKPVASGRMVNS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacggac
atcgatgttcttcctgtaaacttcgcactcctccagttagttggagcccaggtacctgac
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggagggaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactggtgaattgt
cagctggtggaggaagagggtcgggtcagagctatgagggcagctcgatcactgggagag
agaactgtcacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttttggta
ctttttgttgtgcaaaggctagaaccaagattccctcaggcctctaaaacgagcattggt
catgtcgtgcagctactgtatagagcatcttgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat
gatgcccagattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttctcttctgtatggtgacttggcacataaatcacacatgcagtccattattgacaag
ctccagtctccagagtcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgccaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggttgct
gtaaagactgtggtacacgggctagtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccgaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacagggaacgtaatttctgtcata
ggaagccctgaagcaacagggaagatggtgccaagtactaatggaatagctaatctggaa
agtggtgttccccagttgatccctcgctgtgcagatacctccttgagagctttggagaac
accaagaagggagggaagactggagccaatggccagaatgtttctgggtcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacccgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccgcagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacctccaaacgaacagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgaagagcagttaagacggaagccggagcaatgg
gcacagtaccacacacagaaaactcccctggtatcatcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagcgtagatttcagcacagagttctcagaaaat
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagtggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagcgatgga
ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacaggttatcacacgaca
gatcctattcaggccactgcttcccaaggaagtgctactaaacccatcagtgtatcagat
tatgtcccttacgtcaatgctgttgactcaagatggagtgcctatggctcagattctgct
tcatcagcacgttacgcagaacgggacaggttcatagttacagatttgtctggtcaccga
aagcattccagcactggagatctattgagtattgaattacagcaggccaaaagtaactca
ttattacttcagagagaggcgaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaagggactgattatagtgaagactgtgcagacacaaagccagatcgagacatt
gaattggagctttcagccctggatacagatgaacctgatgggcaaggtgaacaaatagaa
gagattctggatatacagctaggtattagttctcaagatgatcagctgctcaatggaaca
accgtagagaatgggcatctgctaaagcagcaccagaaagaatctctggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacatctgttagcaatgcaagctgcctgcccatcagcaca
gcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaat
gactttttaaagcctgttgcaagtggcaggatggttaacagctga
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integrated database retrieval system
