Nelumbo nucifera (sacred lotus): 104586180
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Entry
104586180 CDS
T04131
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nnu04131
]
104586180
Membrane trafficking [BR:
nnu04131
]
Protein recycling
Others
EARP complex
104586180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
104586180
NCBI-ProteinID:
XP_010241639
UniProt:
A0A1U7YRL9
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All DBs
Position
Un
AA seq
1130 aa
AA seq
DB search
MQPGSSAFRSSEENSSVFDGRLIGGFESPSFFFFLPFLFVQGGGMDLSKVGEKILSSVRS
ARSLGLLPSTSDRPEVPARAAAAAAVARALAGLPPHQRHNLPSSSEELVSIYGSRSPSQI
IEELEEDFYKEDFDPVRHVLENIPSEENDLTYFEEKATLRLAQLDRIAERLSRHVMEHHE
EMVKGMHLVRELEQDLKVANVICMNGRRHLISSMHEVSRDLIVTSKSRKKQALLDLVPIL
TELRHAMDMQVALETHVEEGNYCKAFQVLSEYLQLLDSFSELSAIQEMSRGVEAWLAKTL
QKLDSLLLGVCQEFKEESYITVVDSYALIGDVSGLAEKIQSFFMQEVLSETHSVLKNILY
EDRIWRSIQKIRVTYSDLCLQIPESKFRQCLLSTLSVLFKLMSSYYAIMSFQPDKNESEH
QPLNKQKQSDTSGFSDVSIARTSSNSQEVDVSLSESMDRMLVSSSEVESRSTSSVNELTG
TTGFTSSGTQELIYEARDGGSTTSSSGSPWDQLREDSIAFVAQTLQRGRKNLWQLTTSRV
SVLLSSPSVCSISVHQFLRNYEDLNVFILAGEALCGVEALEFRQKLKIVCENYFAAFHRQ
NIYALKMVLEKETWQKMSPDAVQFISLAGLVGDGAPLIVPSDGHSAKIRVLHPKKSPDHI
ESGNQENGFAHWLKAGNPFLLKLSNSSKECLNSPSLSNGTMSSDEKLMDILHNSPRIGNS
PRIGDEHDMHRDSLSEDENEDLLADFIDEDSQLPSRISKPKFSKGHSSHWNDEDIATQTG
SSLCLLRLMDRYARLMQKLEIANLEFFKGICQLFEVYFHFIFETFGHRDTYPSGKGTTDS
PSHRLKMAIARITLDCDQWIKPHMVSFSSASSASSNTTFLQLDVTPTSPPSHVPNTSFGL
KERCAGAESIVLVARILHQSKAHLQSMLLQNNTAIVEDFYASLVDSVPDLSEHIHRTTAR
LLLHINGYVDRIANAKWELKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEH
GLENVAETLIEGLSRVKRCTDEGRAIMSLDLQVLINGLQHFVSINVKPKLQIVETFIKAY
YLPETEFVHWARAHPEYSKNQIAGLVNLVATMKSWKRKTRLEVLEKIESG
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggttcgtctgcattccgtagctctgaggaaaactcttccgtatttgatgga
cgtttaattgggggctttgagagccctagtttctttttcttccttcctttcctttttgtt
caaggaggaggaatggatttatctaaagttggagagaagatactcagttcagtccgatcc
gccagatctctgggacttctcccctctacttctgatcgaccagaggttcctgctcgggca
gcagctgcagctgctgttgctcgagctcttgctggacttcctcctcatcaaagacataac
ctaccatcaagttctgaagaattggtttcaatatatggaagcagatcacctagtcaaata
attgaagaactagaggaggacttctataaagaggattttgatccagttagacatgttctg
gagaatataccatctgaagagaatgatcttacctattttgaggaaaaggccactctaaga
ttagcacaactggataggatagcagagagattatcacgccatgttatggagcaccatgaa
gaaatggtgaaggggatgcatctggtgagggaattggaacaagatttgaaggttgcaaat
gttatttgcatgaatgggagaaggcacctgatctcttcgatgcatgaggtatcaagggat
cttattgttacttcaaaatccagaaagaaacaagcacttctggatttggttccaattcta
acagaacttcgtcatgcaatggacatgcaagtggcacttgaaacccatgttgaggaagga
aactactgtaaagcatttcaagttctgtcagagtatttgcagctcttggatagtttttcc
gagctttcagccatacaagagatgagccgtggtgtagaggcttggctggcaaagacgctt
caaaagctagattcactattgctaggagtttgccaagagttcaaagaagagagctatata
actgtagttgattcttatgcattgattggggatgtatctggacttgcggaaaaaatacag
agcttttttatgcaagaagttctctcagaaacacattctgttttaaagaatattttgtat
gaggatcggatatggcgtagcattcagaagattagggttacatacagtgatctctgcctt
cagatacctgaatccaagtttagacaatgtttattaagcacattgagtgtgctatttaag
ttgatgtcttcatattatgcgattatgagctttcagcctgataaaaatgaatcagaacat
cagcccttgaataagcagaagcaaagtgacacttctggattttcagatgtttcaatagca
agaacttcaagtaattcccaagaagttgatgtttctctatctgaatccatggacagaatg
ctggtttcatcctcggaggtagaatctagaagtacttcgtctgtgaatgaattgactggg
accactgggttcacatcctcaggtactcaagaactaatttatgaggcaagagatggtggc
agtacaacatcgagcagtggttccccatgggatcagctgagggaagattctattgcattt
gttgcgcagacattacagagagggcgaaagaacctttggcaacttacaacaagccgtgta
tcagtattgctttcttcaccttctgtttgctcaataagtgtgcaccaattcttaaggaat
tatgaggatttaaatgtcttcatcttagcgggagaagctctttgtggagttgaagcacta
gagttcaggcagaaattgaagattgtttgtgaaaattattttgcagcctttcatcggcaa
aatatatatgcactgaagatggttttggagaaggagacttggcagaaaatgtcaccggat
gcagtacaatttattagtttagctgggcttgtgggtgatggagcacctttaattgttcca
tctgatggtcactctgctaagattcgggtgcttcatcccaagaaatctcctgaccacatt
gaaagtggtaaccaggaaaatggatttgctcattggcttaaagctggaaacccttttctg
ttgaagttgagcaatagttccaaagaatgcttgaattctccctcactgtctaatggcaca
atgtcatctgatgaaaaacttatggatattttacacaattctccaagaattggcaattct
ccaagaattggtgatgaacatgatatgcatcgcgatagtctttctgaagatgaaaatgaa
gatcttcttgcagattttatcgatgaggacagtcagctcccaagtaggatttctaaacct
aaattttcaaaaggtcactcttcacattggaatgatgaagatattgcaacacaaacagga
tcctcactttgtcttctaaggttgatggacagatatgcaaggctaatgcagaaattggaa
atagctaaccttgagttttttaaggggatatgccaattgtttgaagtttatttccatttt
atatttgaaacatttggtcatcgagacacatatcctagtggaaagggcacgacagactct
ccatctcatcggctgaagatggcgatagctagaataacactagactgtgatcaatggata
aaaccccacatggtttcattttcttccgcttcatcagcatcttcaaacacaactttcttg
caacttgatgtaacacctactagtcctcccagccatgtgccaaatacttcatttggactg
aaggaaagatgtgcaggtgctgagtcaatagttcttgttgctaggatattgcatcagtct
aaggctcatcttcagtctatgctcttgcaaaataatacagctattgttgaagacttctat
gcaagtttggtggattctgtgccagatctctcagagcacattcataggacaactgcaaga
ttgcttcttcatatcaatgggtatgtggatcgaattgctaatgctaaatgggagttaaaa
gagcttggactggagcacaacgggtatgttgatctgttgttgggagaatttaagcattat
aaaacaaggcttgctcatggaggaattaggaaggaggttcaggatctcctcctagaacat
ggactggaaaatgttgctgaaacactcattgaaggtttatcacgagtgaagagatgcact
gacgaaggccgagctataatgtcattagaccttcaggtcttaatcaatggtctacaacat
tttgtctccattaatgtgaagccaaagttgcaaattgttgaaacttttatcaaggcatac
taccttccagagactgagtttgtacactgggcacgtgctcatccggaatacagtaaaaat
cagattgcaggtctggtaaacctcgttgccacaatgaaaagttggaaaagaaagacaaga
ttggaggtactagaaaagattgaatcaggttga
DBGET
integrated database retrieval system
