Nelumbo nucifera (sacred lotus): 104587159
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Entry
104587159 CDS
T04131
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03022
Basal transcription factors
nnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104587159
09124 Replication and repair
03420 Nucleotide excision repair
104587159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104587159
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104587159
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104587159
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104587159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
104587159
NCBI-ProteinID:
XP_010242943
UniProt:
A0A1U7Z7I1
LinkDB
All DBs
Position
Un
AA seq
451 aa
AA seq
DB search
MPQVKIIAKNFMDMVAALPAMKLDKLYDNTFICEAVLRSLPPLAKKYALQMLYIDVPVPV
KSMEEWVLPDGFSKHRVAIDRLIQLRVFIENTDRKRETSYLLHPKFKSNLQKYLVYGGVL
PREPMPSNITVRLPTLEELDAYALEQWECFLLQLISSSHAERLTNFSPSMMKVFQRGLLS
QREKGPRLTESGFQFLLMDTNAQLWYIIREYISNSEDRGLDPADLISFLLELSFHATGEA
YNINTLTEIQRSIIKDLADLGVVKLQQGRKESWFIPTKLATNLSVSLSDSSSRKQGLVVV
ETNFRMYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQ
QNAHPRVAEKIPSVPENVTDQIRLWETDLNRVEMIPSHLYDEFPSKGVFEAACEFARENG
GLLWEDPKKMRIVVKGEIHMQMREFLRHQKQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggtgaagatcattgctaagaatttcatggacatggtcgccgctttacctgcg
atgaagctcgacaagctttatgataatactttcatctgcgaagctgttctaaggtctttg
ccacctcttgccaagaagtatgctttacaaatgctatacattgatgtcccagtacctgtt
aagtcaatggaagagtgggtacttccggatggattttctaagcacagagttgccattgat
aggctaatacaattaagggtatttatcgagaatactgacaggaaaagggaaacatcttat
ctgctacaccctaagtttaagagcaatcttcagaagtatctagtatatggtggagtttta
cctagggaaccaatgccttcaaatatcactgtgaggctcccaactctggaggaattagat
gcctatgcacttgagcaatgggagtgcttcttgctacaactcattagctcatcccatgct
gaaaggctaacaaacttcagcccttctatgatgaaagttttccagcgaggtcttttaagt
cagagagagaaaggaccaaggctaactgagagtggtttccagttcttgttgatggataca
aatgcacaactttggtacattatcagagaatacatctctaattcagaggaccgaggtttg
gatcctgcagatttgatttcatttctcttagagcttagcttccatgccacaggagaggcc
tataacataaacaccttgactgagattcagagaagcattatcaaggatcttgcagactta
ggagtagtcaaacttcaacagggtcgaaaggaaagctggtttattcctactaaattagct
actaatctttcagttagcttgtcggattcatcatcacgcaaacagggacttgtggttgtg
gaaacaaattttaggatgtatgcatactcatcatctaaactacattgtgagattttgcgc
cttttttcaagggttgaatatcaacttccaaatcttatagttggagcaataacaaaagaa
agtttatataacgcttttgaaaatggtatcacagcagaacagataatttctttccttcag
cagaatgcacatcctcgagttgcagagaagataccatctgtaccggagaatgttacagat
cagattaggctgtgggaaactgatttgaacagagttgagatgattccttcgcatctctat
gatgaattcccctcaaagggagtttttgaagctgcctgtgagtttgcaagagaaaatggt
ggattgttatgggaagatcccaaaaagatgcgcatagtggttaaaggagagatacacatg
cagatgcgagaatttctccgccatcaaaagcaatag
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