Nelumbo nucifera (sacred lotus): 104587562
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Entry
104587562 CDS
T04131
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
nnu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104587562
03083 Polycomb repressive complex
104587562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnu03036
]
104587562
Enzymes [BR:
nnu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104587562
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104587562
HDAC complexes
Sin3A-HDAC complex
104587562
BRAF-HDAC complex
104587562
REST complex
104587562
SHIP complex
104587562
MiDAC complex
104587562
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104587562
Heterochromatin formation proteins
Other heterochromatin formation proteins
104587562
Chromatin remodeling factors
NuRD complex
104587562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104587562
NCBI-ProteinID:
XP_010243527
UniProt:
A0A1U7YT92
LinkDB
All DBs
Position
Un
AA seq
430 aa
AA seq
DB search
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSEDYIEFLHRITPETQHLFTNELEKYNLGDDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCGASGFCYMNDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDVKEIGEREGKYYAINVPLKDGIDDSSFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHSECVRFVKKFNLPLLVTGGGGY
TKENVARCWAVETGALLDTELPNEIPDNEYIKYFAPDYSLKIPNGNLENLNSKSYLGTIK
MQVFENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQIQRDDEYYEGD
NDNDQSMDDA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgaaggaccggatatcttacttctacgatggagatgtgggcagtgtttatttt
ggcccaaatcatccgatgaagccacatcgtctttgtatgacacaccatcttgtcctctca
tatgagctccacaagaagatggaaatatatcggcctcacaaggcataccctgtcgagctt
gctcagttccattcagaagattacattgagttcttgcaccggataactcctgaaactcaa
catctgttcaccaatgaactggaaaaatataatcttggagatgattgcccagtttttgac
aacttgtttgagttctgtcaaatttatgcaggaggaacaatagatgctgcacgcagattg
aataatcaactttgtgacattgccataaactgggctggtggtctacaccatgcaaagaag
tgtggagcatctggtttttgttacatgaatgacttagtcttgggtattctggaacttctt
aaatatcatgcacgggttctatatattgatattgatgtgcatcatggtgatggagttgaa
gaagcattctatttcactgacagggtgatgactgttagttttcacaaatatggggacaaa
ttctttcctggaacaggtgatgttaaggaaataggagaaagagaaggaaagtactatgct
ataaatgtcccactgaaggatggaatagatgattcaagcttcactcgactctttaaaaca
attattgccaaggttgttgaaacatatctaccaggtgttattgttcttcaatgtggagct
gattcacttgctggagaccgcttaggctgcttcaatctctccattgatgggcattctgaa
tgtgtaaggttcgttaagaaatttaatttgcctttattggttactggaggtggagggtac
acaaaagagaatgtggctcgttgctgggctgttgaaactggtgctcttttagatacagag
cttcctaatgaaataccggataatgagtatatcaaatatttcgccccagactattcattg
aagattccaaatggcaacctagaaaatttaaatagcaaatcttatcttggcacaatcaaa
atgcaagtctttgaaaatcttcgttgcatccaacatgctccaagtgtacaaatgcaagag
gttccacctgatttctatatcccagattttgatgaagatgagcagaacccagatgaacga
gtggatcagcacacacaagacaagcaaatccagcgagatgatgaatattatgaaggtgac
aatgacaatgatcaaagcatggatgatgcatga
DBGET
integrated database retrieval system