Nocardioides jishulii: FCL41_11680
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Entry
FCL41_11680 CDS
T06163
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
noi
Nocardioides jishulii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r2
Sigma70_r4_2
RPEL
Motif
Other DBs
NCBI-ProteinID:
QCX28105
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Position
2457340..2459745
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AA seq
801 aa
AA seq
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MRSFPRTSASAPGNRYAERVPSSSDASAVTSALPLIDEPGDAELISAVRGGDLDAYGLLY
ARHVEAARRLARQLAQRADAEDLVAEAFAKVLGVLQRGGGPDVAFRAYLLTALRSLRVDK
ARASSKVQPTDDLEPFDPGVPFRDTAVEGFESAAAARAFASLPERWQLVLWHTEVEGQKP
ADVAPLLGMTPNSVSALAYRAREGLRQAFLNEHANEIEGDTCRWVHQTMGAYIRNGTSRR
DSAKVESHLDECRGCMAIYLELTEVNNNLAGILAPLLLGGLATAYVGSAAAGGAGAASSF
SSAAGRVRDAVMGNTVATVAAGAAGLALAGAAAAAVIMAMNPTEPPLVASDPHSAASVLP
TPLPGMPEGRGGPNGEVPLGAGGLPFGVPFPPGDVPAPGDQPPGAGGVPTDAPNPDGDPP
NDGPGGPDGPGGPDGPGGPDGPDGPVPPPDEPAPTDGPSQTDGPAPTTGPSPSPSDPAPT
PGPGTSPTPEPSPTSEPSSPTPTPGPSPTPQPSPSPEPSPSPSPEPSPSPSPSPSPDPSP
SPSPEPSPTPTPSPSPQPSPSPTPEPSPTPEPSPTPTPTPTPTPEPTPTPTPTPEPSPTP
SPDPSPSPSPEPSPSPSPEPSPTPTPEPTPDPTPTPEPTPDPTPTPEPTPDPTPTPEPTP
DPTPTPTPTPDPSPTPTPTPSPTPEPQPDVKLSATSSRGFLNHEVTATVSGLPKGATATF
TVRDHGLHLYSTSTPGCSSFLGGPVRCTLTGTGTDQVITFSVVRLAGSPVLTLTVASDDV
EDVDLSNNSLDLHLHRDSRDD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgagaagttttcctcggacgagcgcgtcggcgccgggaaatcgctacgctgagcgagtc
ccatcgtcctcggatgcgagtgccgtgacctcagcgctgcccttgatcgacgagcccgga
gacgccgaactcatctcggcggtccgcggcggagatcttgatgcctacggactgctgtac
gcacgacacgtcgaggcggcccggcggctggctcgtcagctggcgcaacgcgccgatgcc
gaggacctggtggccgaggcgttcgcgaaggtgctcggcgtgctccaacgtggcggtggc
cccgacgtcgccttccgtgcctacctgctgactgccctgcgcagcctgcgggtcgacaag
gcccgcgcctcctcgaaggtgcagccgaccgacgacctagagcccttcgaccccggcgtg
cccttccgcgacaccgccgtcgaggggttcgagagcgccgccgcagcgcgcgcgttcgca
tcgctgcccgagcgctggcagctggtgctgtggcacacggaggtcgaggggcagaagccc
gcagacgtcgctccgttgctcggcatgacgcccaactccgtctcagccctcgcctaccgg
gcccgggaaggcctgcgacaggcgttcctcaacgagcacgccaacgagatcgagggcgac
acctgtcgctgggtgcaccagaccatgggcgcctacatccgcaacggcacgtcgcggcgc
gactcggccaaggtggagtcgcacctcgacgagtgccgcggatgcatggcgatctacctc
gagctgaccgaggtcaacaacaacctggcgggcatcctcgcgccgttgctgctgggcggg
ctcgccacggcgtacgtcggctcggccgccgcgggtggcgccggcgcggcgagctccttc
tccagcgcggccggtcgcgtccgcgacgcggtcatgggaaacaccgtcgccaccgtggcc
gccggagccgctgggctggccctcgccggcgcggcggctgccgccgtgatcatggcgatg
aatcccacggagccacccctcgtcgcgtccgacccacatagcgctgcctccgtcctgccc
acgccactgcccgggatgccggaggggcgcggcgggccgaacggcgaggtgccgctggga
gcgggcggcctgccgttcggcgtgcccttcccgcccggggacgtccccgcgcccggagac
caaccgcccggcgcgggtggcgtccccaccgacgcgccgaatcccgacggcgaccccccg
aacgacggccccggcgggcctgacggccccggtgggcctgacggccccggtgggcctgac
ggacccgacgggcccgtcccgccgccggacgagcccgcgccgactgacggaccgtcccag
actgacgggccggcccccaccactggcccttcgcccagcccttccgaccctgctccgacg
ccgggcccgggcacctcacccacgcccgagcccagcccgacgtccgagccgtcgtcaccg
acgccgacgcctggccccagccccacgccccagccgagcccgtcgccggaacccagccct
tcgccgtcgccggagccctcaccgtctccgtcgccgtccccttctccggacccctcaccg
tcgccttctccggagcccagccccacgccgacgccttcccccagccctcagcccagtccc
agccccacgccggagcccagcccgacgcccgagcccagccccacgcccacgccgacgccg
acgccgacgcccgagccaaccccgacgcccacgccgacgcctgagcccagcccgacccct
tcaccggacccgtccccgagcccatcgccagagccctccccgagcccgtcgcctgagccg
tcgcccaccccgacgcccgagcccacgccggaccccaccccgacgcccgagcccacgccg
gaccccaccccgacgcccgagcccacgccggaccccaccccgacacccgagcccacgccg
gaccccaccccgacgccgacgccgacgcctgaccccagcccgacacccacgccgacgccc
agccccacccccgagccccagccggacgtgaagctctcggcgacctccagccgcgggttc
ctcaaccacgaggtcaccgcgacggtctcgggcctgcccaagggagccaccgcgacgttc
accgtgcgggaccacggcctccacctctactcgacgagcacgccgggttgctcgtccttc
ctcggtggcccggtgcgctgcaccctgaccgggaccggaaccgaccaggtcatcaccttc
tcggtggtccgactggccggctcccccgtgctcaccctgaccgtggcgagcgacgacgtc
gaggacgtcgatctctccaacaacagcctcgacctgcacctgcaccgagactcacgcgat
gactag
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