Noviherbaspirillum sp. UKPF54: FAY22_13390
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Entry
FAY22_13390 CDS
T06116
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00521
Streptomycin biosynthesis
nok00523
Polyketide sugar unit biosynthesis
nok00541
O-Antigen nucleotide sugar biosynthesis
nok01100
Metabolic pathways
nok01110
Biosynthesis of secondary metabolites
nok01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FAY22_13390 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FAY22_13390 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FAY22_13390 (rfbC)
Enzymes [BR:
nok01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FAY22_13390 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
QDZ28861
UniProt:
A0A5B8N7D6
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Position
complement(2909317..2909862)
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AA seq
181 aa
AA seq
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MKVTSLAIPDVLVLEPRVFSDDRGFFFESFNQRQFNDAVGRAVAFVQDNHSRSSKNVLRG
LHYQIQQPQGKLVRVVEGEVFDVAVDLRKSSPTFGQWVGEILSAENKKQLWIPEGFAHGF
LVLSERADFLYKTTDYWAPEYERCILWSDAEVAIEWPLHGQPVMSGKDQAGNSFANAGVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttacttctctcgcaattcccgatgtcctcgtgcttgaacctcgcgtcttcagc
gacgatcgtggtttcttttttgaaagttttaaccagcgtcaattcaatgatgccgttggc
cgggctgtagcctttgtgcaggacaaccattcgcgctcttcaaagaatgttctgcgtggt
ctccattaccagattcaacaaccgcagggaaagctggtgcgggtagtggagggagaggtg
tttgacgtcgcagtggatctgcgcaagtcgtcgcccacgttcggccaatgggtcggcgaa
atactaagcgctgaaaataagaaacagctttggatcccagaaggtttcgcacacggcttt
ctggtgctgtcggagcgtgcggatttcctctacaagacgacggattattgggcgccggaa
tatgagcgctgcatcttgtggagcgatgccgaggtcgcaatcgagtggccgctacatgga
caaccggtaatgtccggtaaagaccaggcaggaaattcatttgccaatgccggggtgttt
gcgtga
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