Novosphingobium sp. P6W: TQ38_001210
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Entry
TQ38_001210 CDS
T05550
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nov
Novosphingobium sp. P6W
Pathway
nov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TQ38_001210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nov03400
]
TQ38_001210
DNA repair and recombination proteins [BR:
nov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TQ38_001210
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AXB75289
UniProt:
A0A2Z5E6K9
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Position
1:240260..242842
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AA seq
860 aa
AA seq
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MMTQYLALREVADDCLLFYRMGDFFELFFDDAKTASQVLDIALTTRGEHQGQPIPMCGVP
VHAAEGYLARLIKAGCRVAIAEQTETPAEAKKRGGSKALVARDIVRFVTAGTLTEESLLE
PRRANVLAAACEVRGVVGIASCDISTGRMELEECAPERLAAALARLGASELVAPDGWDAA
PDGVIARGAHEFSSDGGDGRLKLIHGVSTLDGFGAFSRAMLAAAGGLIAYLDHVGRGNLP
LLLPPEARSGDAALAMDEATRASLEILESSQGGRKGSLIDAIDRCVTGAGARQLADDLSA
PLTDRMAIAERLELVEWLHADALLREDLRAALRALPDVGRALGRVVAGRGSPRDLGQLRD
GLAGARTTGERLAMLDNLPVLLERLLPALGGHAELVDHFARALVQSPPTERGQGGYIASG
YDASLDELRVMSGNARRAIAALEAKYREETGVASLKIKHNNVLGYFIEVAQRHADKLMEP
DSGFSHRQTMAGAMRFNAVALHEEAARITEAGGHALAAEEGHFETLVAEAVAARQSIART
AAALARIDVAAGQAERAAEGGWSRPQVVEGISLDIEGGRHPVVESALKAQGERFVANDCR
LASHDRLWLIGGPNMGGKSTFLRQNALIVLLAQAGGFVPAKSARIGMVDRLFSRVGASDN
LARGRSTFMVEMVETAAILAQATDRSFVILDEVGRGTSTYDGLALAWAVAEAVHETNRCR
CLFATHYHELARLAETCEALSLHHVRAREWKGDLVLLHELASGPADRSYGLAVARLAGVP
PKVISRAKSVLEKLEKARAQTGGLAAGLGDLPLFAAVQETQQAPADALRDKLNTLDVDAM
SPRDALEILYDLKREAGTES
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccagtacctcgcccttcgcgaggtcgcggacgactgcctgctgttctatcgc
atgggcgacttcttcgaattgttcttcgacgatgcgaagaccgcgagccaggtgctcgac
atcgcgctgacgacacggggcgaacatcagggccaaccgattccgatgtgcggcgtgccg
gtccacgcggcggaaggctaccttgcgcggctcatcaaggccggctgccgcgtcgccatt
gccgagcagaccgaaactccggccgaggcgaaaaagcgcggcggctcgaaggcgctggtg
gcgcgcgatatcgtgcgtttcgttacggcgggaacgctgaccgaggaatcgctgctggag
ccgcgccgcgccaatgtgctggcggcggcctgcgaagtacgcggggtggtgggcatcgcc
tcgtgcgatatctcgaccggccgcatggaactggaagaatgcgcgcccgagcgtctggcg
gcagcgctggcccggctgggggcgagcgaactggtggcgcccgatggctgggacgcggcg
ccggatggggtgatcgcgcgcggggcccacgaattttcctccgacggcggcgatggacgg
ctcaagctgatccacggcgtctcgacgctcgacgggttcggcgccttcagccgcgccatg
ctggcggcggcggggggccttattgcctacctcgaccacgtcgggcggggtaacctgccg
ctgctgctcccgccagaggcccggtccggcgatgccgcgctggcgatggacgaggcaacg
cgcgccagtctggaaattctcgaatcgtcacaaggcgggcgcaagggcagcctgatcgac
gccatcgaccgctgcgtgaccggcgccggtgcgcgccagttggcggacgatctttccgcc
cccctgaccgaccgcatggcgattgcagagcggctggaactggtggagtggctccacgcc
gatgccctgctgcgcgaagacctgcgcgccgcgctgcgggcgctgccggacgtgggccgc
gcgctgggccgggtggtggcggggcgcggttctccgcgcgatctcggccagcttcgcgac
ggactcgcgggtgcccgcaccactggcgagcggctggcgatgctggacaatctaccggtc
ctgctggagcgcctgctgccggcgctgggcggacacgcggaactggtcgaccatttcgcc
cgcgcgctggtgcagagcccgccgaccgagcgcggacagggcggctacatcgccagcggt
tatgacgcctcgctcgatgaactgcgggtgatgtccgggaacgcgcggcgcgccatcgcc
gcgctggaggcgaagtaccgcgaggaaaccggcgtcgcctcgctcaagatcaagcacaac
aatgtgctgggctatttcatcgaagtggcgcagcgccatgccgacaagctgatggagccg
gacagcggcttttcgcatcgccagacgatggccggcgcgatgcgcttcaacgccgtcgcg
ctgcacgaagaagctgcgcgcatcactgaggccgggggccatgccctcgccgccgaggag
ggccatttcgagacgctggtggccgaggccgttgccgcgcgccagtccatcgcccgcacc
gccgccgcgctggcccgcatcgacgtggccgccgggcaggccgaacgcgcggcggaaggc
ggctggagccggccgcaggtggtggaaggcatctcgctcgatatcgagggcgggcgccat
ccggtggtcgaatctgcgctgaaagcacaaggcgagcgattcgtcgccaacgactgccgc
ctcgccagccacgaccggctctggctcatcggcggccccaacatgggcggtaaatcgacc
ttcctgcgccagaacgcgctgatcgtgctgctggcgcaggcgggcggcttcgtgcccgcc
aagtcggcccggatcggcatggtcgaccgcctgttcagccgcgtcggggcctctgacaac
ctcgcgcgcggccgctcgaccttcatggtggaaatggtggaaaccgccgcgatcctcgca
caggcgaccgaccgcagtttcgtcatcctcgacgaagtggggcgcggcacgtcgacgtat
gatggcctcgcgctggcatgggcggtggccgaggctgtgcacgaaaccaaccgctgccgc
tgcctgttcgccactcactaccacgaactcgcgcggctggcggaaacctgcgaggcgctc
tcgctgcaccatgttcgcgcgcgagagtggaagggcgacctcgtcctgcttcacgaactg
gcgagcggcccggcggatcgcagctacggccttgccgtggcgcggcttgccggcgtgccg
ccgaaggtcatcagccgcgccaagtcggtcctggaaaagctggaaaaggcccgcgcccaa
accggcgggctggcggctgggcttggcgatctgccgctgttcgccgcagttcaggaaacc
cagcaggccccggccgacgccctgcgcgacaagctgaacacgctggacgtcgatgccatg
tccccgcgcgacgcgctcgaaatcctgtacgatctcaaacgcgaggcgggcacggagtct
taa
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