Novosphingobium sp. P6W: TQ38_003605
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Entry
TQ38_003605 CDS
T05550
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00521
Streptomycin biosynthesis
nov00523
Polyketide sugar unit biosynthesis
nov00541
O-Antigen nucleotide sugar biosynthesis
nov01100
Metabolic pathways
nov01110
Biosynthesis of secondary metabolites
nov01250
Biosynthesis of nucleotide sugars
Module
nov_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TQ38_003605 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TQ38_003605 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TQ38_003605 (rfbC)
Enzymes [BR:
nov01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
TQ38_003605 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXB75714
UniProt:
A0A2Z5E7S3
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All DBs
Position
1:726677..727222
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AA seq
181 aa
AA seq
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MNVIPTDIEGLAIIEPRVFGDDRGFFMESWNRQIFADLGLDLDFVQDNHSRSAKGVLRGL
HYQQPNPQGKLVRVTAGRAWDVAVDLRAGSATYGKWAGVELSAENKRMFWVPPGFAHGFV
SLEDGTDFLYKCTAFYTPANEHSLMWNDPEVGIEWPLEGIEPQLSAKDKVGKPLREVEAF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtaattccaaccgatatcgaaggcctggccatcatcgaaccgcgcgtgttcggt
gacgaccgggggttcttcatggaaagctggaaccgccagatattcgccgacctgggcctg
gacctggacttcgtgcaggacaatcacagccgttcggccaagggcgtgctgcgcgggctg
cactatcaacagcccaatccgcagggcaagctggtgcgcgtgaccgccggccgcgcctgg
gacgtcgcggtcgacctgcgcgctggttcggcgacttacggcaagtgggccggggtcgag
ctttcggctgagaacaagcggatgttctgggttccgcccggcttcgcgcatggcttcgtg
agcctcgaggacggcactgacttcctctacaagtgcacggccttctacacccccgccaac
gagcattcgttgatgtggaatgaccctgaagtgggcatcgaatggccgctggaaggcatc
gagccgcagctttcggctaaggacaaggtcggcaagccgctgcgcgaagtggaggctttc
gcatga
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