Nitrosopumilus oxyclinae: C5F49_07900
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Entry
C5F49_07900 CDS
T06689
Name
(GenBank) 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
nox
Nitrosopumilus oxyclinae
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nox03016
]
C5F49_07900
Enzymes [BR:
nox01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
C5F49_07900
Transfer RNA biogenesis [BR:
nox03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
C5F49_07900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Paf67
AAT
Motif
Other DBs
NCBI-ProteinID:
QLH05249
UniProt:
A0A7D5M7C7
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All DBs
Position
1358089..1359120
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AA seq
343 aa
AA seq
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MSCSGETVEEDDEQLLQIRPVITAQLKKAKYGVADHSTVGLCHWTKKSFKHEGSCYKHKF
YGISTHRCMEFSPAGMYCENRCVYCWRPMEFYDSMQMKPEQVAEPEQILTKLMGERKKLI
NGFYGDSRNDKQRLDESLLPAHYAISLSGEPTMYPKLPELIKYLKTFEATKSIFLVTNGQ
EPDMIQKLQDEDALPTQLYLSTNAADYESFMKINKPRYDDSWERWNRTLDMLKDLKTRTV
LRITLIRDHNDQKESIPAFAEMFRKASPHFIEIKSYMHIGRSTNRLEYTNMLEMEEVKSF
SEEIANQSKIFSIMDESIVSRISILQNNERFIDRFIPTYANTI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagttgctctggagaaactgtcgaagaggatgatgagcaattacttcagatcagacct
gtaattactgcgcaattaaaaaaagcaaaatatggtgtagcagatcattcaactgtagga
ctttgtcattggacaaaaaaatcattcaagcatgaaggtagttgttacaaacacaagttt
tatggaatttcaactcatagatgtatggaattttcccctgctggcatgtattgtgaaaat
agatgtgtgtattgttggagaccaatggaattttatgattctatgcaaatgaagccagag
caagttgcagagccagaacagattttaacaaaattgatgggcgaacgaaaaaaattgatc
aatgggttttacggtgattcaagaaatgacaaacaaagattagatgaatctttattgcct
gcacattatgctatctcactttctggagagcctacaatgtatcctaaacttccagaatta
attaaatatctaaaaacatttgaagcaacaaaatcaatttttcttgtaactaatgggcaa
gaaccagacatgattcaaaaattacaagatgaagatgcattaccaacacaattgtatctg
tcaaccaatgctgcagactatgaatcttttatgaaaataaacaaaccaagatatgatgat
tcatgggaaagatggaatagaacacttgacatgttaaaagatttgaaaacaagaacagtg
ttaagaattaccttaatcagggatcataatgatcaaaaagaatcaattccagcatttgca
gaaatgtttagaaaagcaagtccgcactttatcgaaataaaatcatacatgcatatcggg
cgctcaacaaatagattagaatatacaaatatgttagaaatggaagaagtgaagagtttt
agtgaagaaattgcaaatcaaagtaaaatattttcaataatggatgaaagtattgtttca
agaatatcaatattacaaaataacgaacgatttattgatcgttttattcctacttatgca
aataccatttag
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