Nocardioides euryhalodurans: EXE57_16725
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Entry
EXE57_16725 CDS
T05931
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
noy
Nocardioides euryhalodurans
Pathway
noy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
noy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EXE57_16725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noy03400
]
EXE57_16725
Enzymes [BR:
noy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
EXE57_16725
DNA repair and recombination proteins [BR:
noy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EXE57_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QBR93735
UniProt:
A0A4P7GNG5
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All DBs
Position
3446323..3447237
Genome browser
AA seq
304 aa
AA seq
DB search
MLATHTDHVPVGEGWHHEVKWDGVRVLVDVVDGRTRMLSRNGNVVTAAWPDLAEPPLGER
DLLVDGEVIALNDRGIPDFRVLQHRMHVRKASDATRLAEQIPATLMVFDLLRLDGEDLTG
RPLAERRRLLEGLELSETRWQVPAVYDDGQMLWDATGQQGLEGVVSKRLTSRYRFDTRSK
DWLKRAHRHRGSFVVGGWRPQVGTSDRLAALLVGEPTAEGLLYRGRVGSGITGATARMLQ
ERLAPLHLAASPFADEVPRVDALGTTWVEPVVVVDIDTHGLGYDRLRQPSFQGVRTDLTP
EDLS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccacccacaccgaccacgtcccggtcggtgagggctggcaccacgaggtgaag
tgggacggcgtccgcgtcctcgtggacgtggtcgacggccgtacccggatgctgagccgc
aacggcaacgtcgtcaccgccgcctggcccgacctggccgagccgccgctgggggagcgg
gacctgctcgtcgacggcgaggtgatcgcgctcaacgaccgcgggatccccgacttccgc
gttctgcagcaccggatgcacgtccgcaaggcctccgacgccacccgactggccgagcag
atccccgcgacgctgatggtcttcgacctgctgcgcctcgacggcgaggacctcaccggt
cgcccgctggccgagcgtcgccggctgctggagggcctggagctgtcggagacccgctgg
caggtccccgcggtgtacgacgacgggcagatgctctgggacgcgaccggccagcagggg
ctggagggcgtggtcagcaagcgcctcacctcgcgctaccgcttcgacacccgcagcaag
gactggctcaagcgggcccaccgccaccgcggctccttcgtggtgggcggctggcgtccc
caggtcggcacctccgaccggctggccgcgctgctggtgggggagccgacggccgaggga
ctgctctaccggggccgggtcggcagcggcatcaccggcgcgaccgcccgcatgctgcag
gagcggctggcgccgctccacctcgccgcgagcccgttcgccgacgaggtgccgcgggtc
gacgcgctcggcacgacctgggtcgagccggtcgtggtcgtcgacatcgacacccacggc
cttggttacgatcgcctgcgccagccgtcgttccagggtgtccgcaccgacctgaccccg
gaggatctctcgtga
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integrated database retrieval system
