Neofusicoccum parvum: UCRNP2_3288
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Entry
UCRNP2_3288 CDS
T03126
Name
(GenBank) putative swi-snf complex subunit protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
npa
Neofusicoccum parvum
Pathway
npa03082
ATP-dependent chromatin remodeling
npa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
UCRNP2_3288
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
UCRNP2_3288
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npa01009
]
UCRNP2_3288
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npa03021
]
UCRNP2_3288
03036 Chromosome and associated proteins [BR:
npa03036
]
UCRNP2_3288
Protein phosphatases and associated proteins [BR:
npa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
UCRNP2_3288
Transcription machinery [BR:
npa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
UCRNP2_3288
SWI/SNF complex
UCRNP2_3288
Chromosome and associated proteins [BR:
npa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
UCRNP2_3288
PBAF complex
UCRNP2_3288
SWI/SNF complex
UCRNP2_3288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-ProteinID:
EOD49875
UniProt:
R1GE24
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MPSPVASTAALPLQSHDPSQQESTPTAPDAPNGAAGDDAAESQDSARPSSSGQAAEGNGI
IRETKEKAKAVMAASGVDVNASTAQASPSGRAKSPPAGSDTANGVSPSRKRSRSGSRLPS
QPPSQGSSNQNQPSLTEHLISQYSTRDMLHAAAMNDQAAKVRQLMGEKLAEVEYYKQLRQ
QRQIDPGSVFGYGFEGYGNGYTEAKPSRLQYPAQRKRLGNRRSKSLHVPRKDLSKQADTF
EELVPVRLDIEFDKIKLRDTFTWNLHDHLVTPELFAENMVEDFKLPPEMGPHVFRQINTE
IHEQLQDYYPHVFFKEDPLDPHLPYDAYKNDEMRILIKLNVTIGQHTLVDQFEWDINDPM
NSPEEFARSMTRELSLSGEFTTAIAHSIREQCQMFTKSLYITGHPFDGRPVEDADVRDSF
LATPIQSVFRPVQAAKDYAPVLPLK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacccgtcgcgtcgaccgccgcgctcccactccagtcgcacgacccatcgcag
caggaatccaccccgaccgcaccggacgcgccgaatggcgctgctggagacgacgctgct
gagtcgcaggactcggcgcgtccgtcgagctctggccaggccgcagagggcaatggcata
atacgcgagacgaaggagaaagcaaaggcagtcatggccgcgtccggcgtcgacgtgaac
gcgagcaccgcgcaagcatccccttctgggcgcgcgaagtcaccgcctgccggcagcgac
acggccaatggagtctcccccagccggaagcgctcccgttctggttcgcggctgccctcc
cagccgccatcacagggctcttccaaccagaaccaacccagcctcaccgagcacctcatc
agccaatactccacgcgcgatatgctccacgctgccgccatgaacgaccaggctgccaaa
gtccgccagttgatgggcgaaaagctggccgaggtagagtactacaaacaactgcgccag
cagcgccagattgacccaggctccgtgttcggctacggtttcgagggttacggcaatgga
tatacggaggcaaagccgtcgcgactccagtacccagcacagcggaagcggcttgggaac
cgccgctcgaaaagcttgcatgtgccccggaaggacctctcgaaacaggctgataccttt
gaagagctggtgcccgtgcggctggacattgagttcgacaagatcaagctgcgggatacc
tttacgtggaatctacacgaccaccttgttacacccgagctgtttgcagagaacatggtc
gaggacttcaagcttcccccggagatgggtcctcatgtcttccgtcaaatcaacacagag
attcacgagcagctccaagattactatccccatgtctttttcaaggaagacccgctagac
ccgcacctgccttacgacgcctacaagaacgacgaaatgcgtatattgataaaattgaac
gtcacgattgggcagcatacccttgtggaccagttcgagtgggatatcaacgaccccatg
aactcgccagaagagtttgccagatccatgacgagggaactctcgctgtcgggcgaattc
acaacggccatcgcccactccatacgagagcaatgccaaatgttcaccaaaagcctctac
atcacaggccatccctttgatggccgcccggttgaagacgcggatgtgcgtgacagcttt
ttggctacgcccattcagtctgtttttcggccggtgcaagcagccaaggactacgcgccg
gtgctacccctgaagtaa
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