Neofusicoccum parvum: UCRNP2_4126
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Entry
UCRNP2_4126 CDS
T03126
Name
(GenBank) putative nuclear matrix protein
KO
K12878
THO complex subunit 1
Organism
npa
Neofusicoccum parvum
Pathway
npa03013
Nucleocytoplasmic transport
npa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRNP2_4126
09122 Translation
03013 Nucleocytoplasmic transport
UCRNP2_4126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_4126
03041 Spliceosome [BR:
npa03041
]
UCRNP2_4126
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
UCRNP2_4126
Spliceosome [BR:
npa03041
]
Complex C
Other components
EJC/TREX
UCRNP2_4126
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
UCRNP2_4126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
EOD49114
UniProt:
R1GSU4
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MEVDVDPKPEVPSITTEGAAVDEETKPEQKKDSKVLDTDTLYPVFWTLQQAFSNPPKLFT
GEYLSEFKTGIEHTIAKFKDVPKVIPAKKQDKTDDKDGPKNEGRPEGKPEGKHGNADAED
VHGVKRKHDDGEEEFASPYNPKYLTSRDLFELELSDLAFQRHILVQALVLLDFLLSLTEK
SKEKTQKWLSTVGNPNRAVQYGYTLSAADADWASKTRTAITAYLQLLPDGKFYYRMVDTG
LKDSERYTIPTAESLHRGIQGDELDLEMAMTDEDKHNLQEAKASKTWRALRIASKDRLSL
FDKIDDGKQLEALFEPEGGDDAGKDERATTEAAESRVDGSVAEAASQAHVQEEQRAEQQG
SQVTAR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgacgtggaccctaagccggaagtaccatcgatcacgaccgaaggtgcggca
gtggacgaagagaccaagccggagcagaagaaagacagcaaagtattggatactgacacg
ctgtaccctgtgttctggaccttgcaacaagctttctccaatccaccaaagctgttcacc
ggcgagtatctcagcgagttcaagaccggaattgagcatactattgcaaagttcaaggat
gtccccaaagttatcccagctaagaagcaggacaagaccgacgataaggacgggcccaag
aacgaaggcaggcccgagggcaagcccgagggaaagcacggcaatgccgatgccgaggat
gtacatggtgtgaaacggaaacatgacgacggagaagaagagttcgccagcccgtacaac
ccgaagtacttgacaagcagagacctattcgagctagagctcagcgatctggcgttccag
aggcatatcctggtccaggcactggtcctccttgactttctactctcgttgacggaaaag
tccaaggaaaagacgcaaaaatggctatcgacagtgggcaacccgaaccgagccgttcaa
tacggttacactctaagtgctgcagatgccgactgggcgtcaaagaccaggacagcgatc
acagcgtacctacagcttctaccagacggcaaattctattaccggatggtggacacggga
ttgaaggattctgagaggtacactatccccacggccgagtcgctgcacagagggatccaa
ggggacgaattagatctggagatggccatgacggacgaggataagcacaacttgcaggag
gctaaagcaagcaaaacgtggagggcactccgcattgcatccaaggacaggctaagctta
ttcgacaagatcgacgacggcaaacagctcgaggcgctgttcgagcctgagggcggcgac
gatgcgggcaaagacgagcgggcaacgacggaggcggcggagagcagggttgacgggtcc
gtggcggaagcggcatcgcaggcgcatgtgcaggaggaacaacgggccgagcagcaaggc
agtcaagtgacggcgcggtga
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integrated database retrieval system