Neofusicoccum parvum: UCRNP2_6483
Help
Entry
UCRNP2_6483 CDS
T03126
Name
(GenBank) putative n domain protein
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
npa
Neofusicoccum parvum
Pathway
npa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRNP2_6483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npa03019
]
UCRNP2_6483
Messenger RNA biogenesis [BR:
npa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRNP2_6483
mRNA degradation factors
5'-3' decay
Decapping complex
UCRNP2_6483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YjeF_N
FDF
Motif
Other DBs
NCBI-ProteinID:
EOD46794
UniProt:
R1GLB5
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MAAQLIGIAVLVTLKDPQHTVVQGRVANVIEQTATLVLQDVYFPATGHRLPGFTVEGSHI
ADISVQPVQTTVSTPTYPPSHAPPFPPQPQHIPPTAVQYGARPPTAPPVEAPTLPQTHEA
PAVEPAKPKQAFVDPAILSFGKRPAVQTAEAPTTPVKPIAAAAAAKKPGNTSPFAGIAKK
ASISGKSGKAKEDPATLTRPFNALGLETGEDVEESDDPTINEEHMRRASISKTRTGKPLE
TPVKAVKKTKKGARGKKQKNEQLLPPAQDGEAPDSSPEAARKTPANYKGKGWRQTPMLQD
QTATRTPGLIGGKVGMEAVRVANRKSRRQKALDATNGWATEDATDVQELPDFDFAENLSK
FDKRTVFEQIRNEDTTADEDRLTQASFRISPSDTTCHTITPGTMTAVEELAEVEFGLTED
IMSENAARGIAQVALLAVNPGGRRLARENLAVNARPVVVVLAGNHRTGARAIAAARHLHA
RGPRVVVALLGYERPADYDKDVRRQLELLKRFGGFARSWTDVQRGLKRLEAPPELIIDAL
LGRNKEFDALGREDRSTAMTIVGWANKSRASVLSVEGPSGVGGSTGEVSIIEGEPLEVRA
KYIVCLGAPRSGLFRALQMGYVRDSDWLIWVVDLGLNRAWKRVGGLGRKGVRFGSEWAVQ
IRFDAGEAETEGGEGR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccagctcatcggcatcgccgtgctcgtcacgctcaaggacccccaacacacg
gtcgtgcaagggcgcgttgccaatgtcatcgagcagacggccaccctcgtgctccaggac
gtctactttcccgcgaccggccaccgtctacctggcttcaccgtcgagggctcgcacatt
gccgacatctccgtccagcctgtgcagaccactgtgtctactcccacctaccctccgagc
catgctccgcccttccctccgcagccgcagcacattcctccaaccgccgtccaatatgga
gcccgcccgcccaccgccccgcctgtcgaagcgcccacattgcctcagacccacgaagcg
cctgccgtggagccagccaaaccgaagcaggcattcgtggacccagcgattctgagcttt
ggcaaacggcctgccgttcagaccgcggaagcccccactacaccggtcaagcccattgct
gccgccgccgcagccaagaagccaggcaatacctcgccgttcgctggcatagcaaagaag
gcgtccattagtggcaagagtggaaaggccaaggaggacccggctaccctgacgagaccg
ttcaacgcactgggtcttgagactggtgaggatgtagaagagtcggacgaccccacgatc
aacgaggagcacatgcgaagggccagcattagcaagacgcggacgggcaagccgttggaa
acaccggttaaggcagtaaagaagacgaagaagggcgctaggggcaaaaagcagaagaac
gagcagcttttgccgccggctcaggatggagaagcgccagactcgtcaccggaagctgcg
cgcaagacaccagcgaactacaagggcaagggatggaggcaaacgccaatgctgcaggat
cagacagcaacccgtacgccaggcttgattggtggcaaggtcggcatggaggcagtcagg
gttgccaatcgcaagtcaaggagacaaaaggctctggatgctaccaatgggtgggcaacc
gaggacgccactgacgttcaggagctcccagacttcgactttgccgagaacctctcaaag
ttcgacaaacgcaccgtgttcgagcagatccggaacgaggacaccacggcagatgaagac
cggttgactcaagcaagcttccgcatctctccgtcagacaccacctgccacacaatcacg
cccggtaccatgaccgccgttgaggaactagcagaagtcgagtttggtttgacggaagac
atcatgtctgagaacgccgctcgcgggattgctcaagttgcactactagcagttaatccg
ggtggcagacgtctggcacgggagaaccttgcggtgaacgcacgtccggtagtagtcgtc
ctcgccggcaaccaccgcacaggcgcccgtgccatcgcagcagcacgacacctccacgcc
cgtggccctcgcgtcgtcgtcgcgcttctcggctacgaacggcccgccgactacgacaag
gacgtgcggcggcaactcgaactcctgaagcgcttcggcggcttcgcccgcagctggacc
gacgtgcagcggggtctcaagcgcctcgaagcgccgccggagctcatcatcgacgcgctc
ctgggccgcaacaaggagttcgacgcgctgggccgcgaggaccgcagcacggccatgacc
atcgtcggctgggccaacaaatcgcgcgcctcggtcctgtccgtcgagggcccgtcgggc
gtcggcgggagcacaggcgaggtcagcatcatcgagggagagccgctcgaggtgcgagct
aagtacattgtctgcctcggcgcgccccgctcgggacttttccgcgcgctgcagatgggg
tacgtccgcgattcggactggctgatctgggtcgtggatctggggctcaaccgtgcatgg
aagagggttggcgggctgggtaggaaaggcgtgaggtttgggagcgagtgggcggtgcag
attaggttcgatgcgggagaggcggagacggagggcggggaggggaggtag
DBGET
integrated database retrieval system