Nothoprocta perdicaria (Chilean tinamou): 112944632
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Entry
112944632 CDS
T07556
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03022
Basal transcription factors
npd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112944632
09124 Replication and repair
03420 Nucleotide excision repair
112944632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112944632
03400 DNA repair and recombination proteins [BR:
npd03400
]
112944632
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112944632
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112944632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
C1_2
VWA_3
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
112944632
NCBI-ProteinID:
XP_025891892
Ensembl:
ENSNPEG00000015905
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLQEHHGQVRLGMMRH
LYVVIDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVAALKKAVDMNCHGEPSLYNSLNLAMQTLKHMPGHTSREVLIVFSSLTTCDPA
NIYDLIKSLKAVKIRVSVIGLSAEVRVCTLLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMXQLENNSEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERYCQGCQGEIKDQNVYIC
KVCQNAFCVECDLFIHDSLHCCPGCIHEQPTPASV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagcctgaaaggaccaagcggtgggaaggaggctacgaacgaacatgggag
atccttaaagaagatgaatctggttcactcaaagctactattgaggacattcttttcaag
gctaagcgaaaaagactccaagaacaccatggacaggttcgacttggcatgatgcgtcac
ctttatgtggttattgatggatcaagaactatggaggaccaagatctaaaacccaacaga
cttacttgcactttaaagttattggagtattttgttgaggagtactttgaccaaaatcct
attagtcagattggcttaattgtaacaaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaactcaaaaaagcacgtagctgctctgaagaaagcagtagatatgaactgtcat
ggagagccatctctgtataattccctaaatttggctatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttgatagtcttcagcagtctgacaacatgtgatccagcc
aacatctatgatctaattaagagcttaaaagcagttaagatcagagtatctgtcatcggt
ctaagtgctgaagttcgcgtttgtactttgcttgcccgagaaacaggtggaacataccac
gttattttagatgaaagtcattataaggaactactgatgcatcatgttagtcctccacct
gccagttcaagttctgaatgctcccttattcgaatgggttttcctcagcacactattgct
tctctgtctgatcaagatgcaaagccatcctttagcatggygcaattggaaaacaacagt
gagccagggcttacactgggtggatatttctgtcctcagtgcagagccaaatattgtgaa
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcccctcatctggctcgg
tcttaccatcacttgttccctttggatgcctttcaggaagttcccctggaagaatatcaa
ggagaacggtactgtcaaggctgccagggagaaataaaagatcaaaatgtttacatatgt
aaagtatgtcagaatgcattttgcgtggaatgtgacctgtttattcatgactccctacac
tgctgtcctggctgcattcacgagcagccaactcctgcgtctgtatga
DBGET
integrated database retrieval system
