Nothoprocta perdicaria (Chilean tinamou): 112947109
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Entry
112947109 CDS
T07556
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03013
Nucleocytoplasmic transport
npd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112947109 (UPF3B)
03015 mRNA surveillance pathway
112947109 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112947109 (UPF3B)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112947109 (UPF3B)
mRNA cycle factors
P-body specific factors
112947109 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
112947109
NCBI-ProteinID:
XP_025894908
Ensembl:
ENSNPEG00000003866
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MKEDKENSRPKERRGAAVASGTAPAPPLGPAAATDGRGGGEADRLERPKDKKETLSKVVI
RRLPPSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRDRFD
GYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDEKLT
STPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRK
WKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLEKKEKSKKLEKE
TLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQREKLRRQ
EEERRRQKERFEKEKVFRRKEEEVKKERDLLREKGKKSDLTDFTSNPDRPEKVTKDDKKE
DTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKSTDQGADKKPESETSNTKEEE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacagcaggcccaaggagcggcgcggagccgccgtcgctagc
ggtaccgcgcccgccccgccgctggggcccgccgccgccacggacggccgcgggggcggc
gaggccgaccgcctcgagcggcccaaggacaagaaggagacgctgagcaaggtggtgatc
cggcggctgccgcccagcctcacgaaggagcagctggaggagcacctgcagccgctgccc
gagcacgactacttcgagttcttcgccaacgactccagcctctacccgcacatgttttcg
agagcctacatcaacttcaaaaaccaggaagacatagtcctcttcagggatcgctttgac
ggctatgtttttgtggatcacaagggtcaggaatatgcagccatagtagagtttgcacct
ttccaaaaagctgcaaaaaagaagagtaagaagaaggatgccaaaacggggaccattgaa
gacgatccagaatacaagaagtttctggaaagttacagtgcagatgatgaaaaattaacc
tcaactcctgaaacgctgctggaggaratagaggcaagaaacaaagaactgatagctaag
aagactactcccttactgaacttcctgaaaaacaaacagaggctgagagaagaaaaaaga
gaggagaggaggaggagagaactggaaaggaaaagacaaagagaagaagaaagaagaaag
tggaaggaggaggagagaaggaagcgaaaagaagcggaaaaactgaagaaggtagacaga
tgtccagaaaaagaaagggacagatcaaaagaagagccaaagattaagctgcttaagaag
cctgaaaaagatgaaaaagacttggagaaaaaagaaaaatccaagaaactggaaaaagag
actctaagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgatggggagaca
aaagaagagaaggcaaaaaagtcagaagatgagtgtgtaaaggactacagggatcgagat
agagattttgaaagagacagagaatatgagagagcacagagggagaaactgagacgccaa
gaagaggagcgtcggaggcagaaagagcgctttgagaaagagaaggtttttagaagaaaa
gaggaagaggtgaaaaaggagagagacttgctcagagaaaagggaaagaaaagtgatctc
acagactttaccagcaacccagacagacctgagaaagtaaccaaagacgataaaaaagag
gatacaattaagagggatcgtatcagaaacaaggatcgtccagcaatgcagttgtaccag
ccgggagcccgaagccgaagcagattgtgtcagtatgaagacagtgccgcaaagtccaca
gatcagggagcagataagaaaccagagagtgagacgagtaacacaaaggaagaagagtga
DBGET
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