Nothoprocta perdicaria (Chilean tinamou): 112952627
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Entry
112952627 CDS
T07556
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112952627 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npd03041
]
112952627 (DDX46)
Enzymes [BR:
npd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112952627 (DDX46)
Spliceosome [BR:
npd03041
]
Complex A
U2 snRNP components
U2 related factors
112952627 (DDX46)
Complex B
112952627 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
112952627
NCBI-ProteinID:
XP_025901308
Ensembl:
ENSNPEG00000001953
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MLLSMHYRKRSASRGRSGSRSRSRSPSDKRGKRGDDRRSRSRDRERRRERSRSRDKRRSR
SRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSPSPSKNKKTENRSRSKE
KTDGVEVSKEKKKEKDDKEEEKEKDAPPPTVASENFDQNKLEEEMRKRKERVEKWREEQR
KKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGSEVEDEELDPLDAYMEEV
KEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYS
SEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRL
ELEGITVKGKGCPKPIKTWVQCGISMKILSALKKHGYEKPTPIQTQAIPAIMNGRDLIGI
AKTGSGKTIAFLLPMFRHIMDQRPLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR
VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMF
DMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQ
HVIVIEEENKFLKLLELLGLYQEKGSVIIFVDKQEHADGLLKDLMKAAYPCLSLHGGIDQ
YDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGN
KGYAYTFITEDQARYAGDIIKALELSGTPIPADLEKLWADFKDQQKAEGKMIKKSSGFSG
KGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMGTPGT
SNVPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTIQ
APTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARW
KVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITR
LIKEELIRLQNSYQPTNKGRYKVL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctgctatccatgcattaccggaagcgctccgcgtcgcgcgggcgctcgggcagccgc
tccaggagtcgctctccgtcggacaagagagggaagcgcggggacgaccggcgctcccgg
agcagggaccgggagcgcaggcgggagaggtcgcgcagcagggacaagaggaggtctcgg
tcgcgcgacaggaagcggcaaagacgttcaagaagtagagaaagggaacggagcagggag
agaagaagatcccggagccgagagagaagacgctctagaagcagaagtagagggagacgg
tctcgatcccctagtccgagcaagaacaagaaaacagaaaacagatcaagatctaaagaa
aaaactgatggtgtggaagtttctaaagagaagaaaaaagaaaaagatgacaaagaagaa
gaaaaggaaaaagatgctcctccacctactgtggccagtgagaatttcgatcagaacaaa
ctagaagaagaaatgagaaaacgaaaagaaagagtggagaagtggagggaagagcaacgc
aagaaggctatggaaaacataggagaactgaaaaaggaaattgaagagatgaaacaaggg
aaaaagtggagtttggaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaa
gaaggcagtgaggttgaagatgaagaattagatcctttggatgcttatatggaagaagtt
aaagaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaag
aaaactggaccaactgttaccaaagtagtaactgtggtgacaactaaaaaggcagccgta
gaatcagagaagaagaaaggggagctcatggagaatgaccaggatgcaatggagtattcc
tcagaagaggaggaagttgatcttcagactgccctgactggctaccagaccaagcagaga
aagctgctggaaccggtggatcacggaaagatagaatatgagcccttcaggaaaaacttc
tatgttgaagtgccagaactagctaaaatgactcaagaagaggtgaatgtgtacagactg
gaattggagggaattacagtgaaaggaaagggctgccccaaaccgataaaaacttgggta
caatgtggtatttccatgaagattctctccgccctcaaaaaacatggctatgaaaagccc
actcccattcaaactcaggctatcccagcaatcatgaatggacgggacttgatcggcatt
gctaaaacgggaagtggaaaaactattgcatttcttttgcccatgtttagacacattatg
gatcagaggccgttagaagaaggagaaggtcctatagcggtcattatgacacctactcga
gagttggctctgcagattaccaaggagtgtaagaaattctcaaagacgcttggacttcga
gttgtctgtgtgtatggaggaacaggaatcagcgaacagatagctgaactcaaaagaggt
gctgaaattattgtttgtacacctggacgtatgattgacatgttagcagctaacaatggt
cgggtgacaaatctccgccgagtcacttacgttgtacttgatgaagcagacagaatgttt
gacatgggttttgagcctcaggtcatgcgcattgtagacaacgtgaggcctgatcgtcag
actgtcatgttctctgctacttttcccagagctatggaggctttagctcggaggatcctg
agcaaacccatagaagtgcaggttggaggcagaagtgttgtctgttccgatgtggagcaa
cacgttattgtcatagaagaggagaacaaatttttgaagttacttgagctactgggactc
tatcaggagaaaggctcagttatcatatttgtagataaacaagaacatgccgatggtctg
ttaaaagatttaatgaaagctgcttatccttgcttgtctctccatggaggtattgatcaa
tatgacagggacagcataattaatgatttcaagaatggaatttgcaaacttctggtggcy
acatctgtagctgcaaggggcttggacgtgaaacaattgatgttggtggtcaattatagt
tgtcccaaccattatgaggattatgtgcacagagccggccgaactggacgagctggcaat
aaaggatatgcatacacgttcattactgaggatcaagcacggtacgccggagatatcatt
aaggctttggagttgtctgggactccaattcctgccgacttggagaaactctgggctgac
ttcaaagaccagcagaaggctgagggaaagatgattaaaaaaagcagtggattctctggc
aaaggttttaaatttgatgaaacggaacaggctttggctaatgaaagaaagaaactacag
aaagcagctcttggcttgcaagattcagatgatgaagacacagctgttgatattgatgaa
caaattgaaagcatgttcaattcaaagaaaagagtaaaagacatgggaacaccgggaaca
tcaaatgttcctacaccatcagctggtaatgcagaaaaattggaaattgctaaaagattg
gctttgaggatcaatgctcagaagaatcttggagcagaggcacaagtatttgtacctttc
cactttaaggatgtgatgcagcaggctacaaatgctatcttgagaggaggcacaatccaa
gctcctactgtatctgccaagacaattgcagaacaactggctgaaaaaatcaatgctaag
ctcaattacgtacccatagaaaagcaggaggaagagaaacaggatggagggcaaaatgag
tccttcaagagatatgaagaggaattggagatcaatgacttcccacagactgccagatgg
aaagttacatccaaagaagctctgcagagaatcagtgaatattctgaagctgctattaca
atcagaggaacttacttccctccaggcaaggaacccaaggaaggagaacggaagatttat
ttggctattgagagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacgcga
cttataaaagaggagcttatcagactgcaaaattcataccaaccaaccaacaaaggaaga
tacaaagttctataa
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