Nothoprocta perdicaria (Chilean tinamou): 112954970
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Entry
112954970 CDS
T07556
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03013
Nucleocytoplasmic transport
npd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112954970 (UPF3A)
03015 mRNA surveillance pathway
112954970 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112954970 (UPF3A)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112954970 (UPF3A)
mRNA cycle factors
P-body specific factors
112954970 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
112954970
NCBI-ProteinID:
XP_025904038
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
LYPHLYSRAYINFRNPEDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKD
AKAGSIEDDPEYRKFLESYCADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRK
LEKQRIREEKREERRRRELEKKRLREEEKRKRREEERRRRKEAEKQKRISEKEIRIKLLK
KPEKGDEQASEKHKEKDEEDDIEENKWEKSSGFGSTKSKALESSLKEFKEKSQNDSDKEQ
RDTERRFRDKDPERQRYRMDDGRKHRAHYEYDKFVRRNEDELKWGKGYSQDRGKKGNHNY
SFTVETVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGARIRTQPGAAGRACECPGRP
FEDAPEKRSEAENSAGGGSERSEEAE
NT seq
1162 nt
NT seq
+upstream
nt +downstream
nt
cctttatccacatctctactcaagagcatacattaactttagaaatcctgaggacatcct
tctctttagagatcgctttgatggctatgtcttcattgacaataaaggtttagagtatcc
agcagtagttgaatttgctccattccagaagatttcaaaaaagaaattaaagaaaaaaga
tgcaaaagccgggagcattgaagatgatccagaatataggaaatttttagagagttactg
tgcagatgaagagaaaatatgtgcgaatcctgagactcttttgggagagattgaggccaa
aacaagggaactcattgctagaagaaccacaccccttttggaatatattaaaaatagaaa
attagaaaagcagagaatacgagaagagaaaagagaagagcgaaggcggagggagctgga
aaagaaacggctgcgagaggaggagaagaggaaacgcagagaagaggaacgacgtagaag
gaaagaagcagaaaagcaaaagagaatctctgaaaaagaaataaggatcaagcttcttaa
gaagcctgaaaaaggagatgagcaggccagtgaaaagcacaaagaaaaggatgaagaaga
tgacattgaagaaaacaaatgggaaaaatcatctggatttgggagtacaaaatccaaggc
attggagagttcactaaaagaattcaaggaaaagtcacaaaatgacagtgacaaagagca
aagagatacggagagaagatttcgagacaaagaccctgaaaggcaaaggtatcgaatgga
cgatggccggaagcacagagctcactatgagtatgacaagtttgtgagaaggaatgaaga
cgagctgaaatgggggaaaggatacagccaagacagaggaaagaaagggaaccacaacta
cagcttcactgtggagacagtagacaaactgggtaaagaggacaagtgtgatgacatggc
atccaaaaaggagcgcataagaaataaggaccggccggccatgcagctgtaccagcccgg
agcccgcatccgaacgcagccgggagctgccggcagagcgtgtgagtgcccggggaggcc
cttcgaggacgctcccgaaaagaggagcgaggctgagaattcagccggaggcggctcgga
gaggagcgaggaggcagaataa
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