Nothoprocta perdicaria (Chilean tinamou): 112955326
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Entry
112955326 CDS
T07556
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112955326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112955326
03036 Chromosome and associated proteins [BR:
npd03036
]
112955326
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112955326
Chromosome and associated proteins [BR:
npd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
112955326
Chromatin remodeling factors
BAF complex
112955326
PBAF complex
112955326
GBAF(ncBAF) complex
112955326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
112955326
NCBI-ProteinID:
XP_025904386
Ensembl:
ENSNPEG00000015305
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MSTPEPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQP
PGAYAQDNMHQMHKPMDSMHEKGLADDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPPLSSAPGGVPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPVQGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDETRYSA
GSGSGSASFPHTASTLCLNAELEEPPLKVRGEEDEVPDDETVNQMIARHEEEFDLFMVSM
AQAAEEKRGLPFSGVAAKTVFLTEPN
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccggagccgccgctgggcggcacgccgcggcccggcccctcgccaggcccc
ggcccctcgcccggggccatgctggggcccagccctggcccgtcgcccggctccgcacac
agcatgatgggccccagccccgggccgccctcggccgggcacccgctgccgccccagccg
cccggcgcctacgctcaggacaacatgcaccagatgcacaagcccatggactccatgcac
gagaagggcctcgccgacgatccccgctacggccagatgaaaggaatgggaatgcggccc
ggcgggcacgcgggaatgggccctcctccgagccccatggatcagcactcgcaagggtac
ccctctccgctcggcggctccgagcacgcgtcgagcccggtcccggccaacggcccgtcc
tccggcccgccgctctcctcggctcccggcggcgtcccgctcgacggcgccgacccgcag
gcgctggggcagcagaaccgcgggcccacgcccttcaaccagaaccagctgcaccagctc
cgagctcagatcatggcctacaagatgctggcccgyggccagccgctccccgaccacctc
cagatggccgtgcagggcaagaggcccatgcctgggatgcagcagcagatgccgacgcta
cctccgccctccgtgtccgggacaggaccggtgcaaggaccagtgcaagggcctggccca
ggaccaacacctcccaactataacagacctcacggtataggagggcctaacatgccccct
cccggcccctcaggagttcccccgggaatgcctgggcagccccccggcggcccccccaag
ccctggcctgaaggaccaatggcgaatgctgcagcccccacgagcacacctcagaaactg
atccctccgcagccgacgggccggccgtcgccggcgccgccggccgtgccgcccgccgcc
tcgcccgtgatgccgccgcagacgcagtcgccggggcagccggcccagccggcccccatg
gtgcagctgcaccagaagcagaaccgcatcacgcccatccagaagccgagggggctcgac
ccggtggaaatcctgcaggagcgggagtacagactgcaagcgcgtattgctcaccgaatc
caagagctcgagaaccttcctgggtccctggctggtgacctgagaaccaaagctaccatt
gaacttaaagcactgagactgctcaacttccagagacagctgcgtcaggaagtcgtggtg
tgcatgaggagggacacggccttggaaacggccctcaacgccaaggcctacaagcgcagc
aagcggcagtccytgcgcgaggctcgcatcaccgagaagctggagaagcagcagaagatt
gagcaggagcggaagcgcaggcaaaagcaccaggaatacctcaacagcattctgcagcat
gctaaggatttcaaggaataccaccggtccgtcacgggcaaaatccagaagctcaccaag
gcggtggccacgtaccacgccaacacggagcgcgagcagaagaaggagaatgagaggatc
gagaaggagcgaatgcgtcgcttgatggctgaggatgaggaaggataccgcaagctgatt
gatcagaagaaggacaagcgcctggcctacctgctgcagcagacggacgagtacgtagcg
aacctgaccgagctcgtgcggcagcacaaggctgcgcaggtggccaaggagaagaagaag
aagaagaaaaagaagaaggcagagaatgcagaagggcagactcctgcgatcggaccagat
ggcgaacctctggatgagacgagccagatgagcgacctccccgtgaaggtgatccacgtg
gaaagcggcaagatcctcaccggcacggacgcgcccaaggccggacagctggaagcctgg
ctggagatgaacccaggatatgaagtggcgccaagatctgacagtgaagaaagtgggtca
gaggaagaggaggaggaggaggaagaggaacagccccaacctgctcagcctgccctgcct
gtggaggagaagaaaaagatcccggatccagacagtgacgatgtgtcagaagtggatgcc
aggcacattattgaaaacgcgaagcaagatgtcgacgacgaatacggagtctcccaagct
ctggccaggggcctgcagtcctattacgccgtggcgcacgcggtcaccgagcgagtggac
aagcagtccactctcatggtcaacggcgtcctcaagcagtaccagatcaaaggtttggag
tggcttgtgtccttgtacaataacaacctgaatggtatcctggcagatgaaatgggtctg
ggcaaaacaatccagaccatcgctttaattacatacctcatggagcacaaacggatcaac
ggacccttcctcattatagtacctctctcaactctgtcaaattgggcatacgagtttgat
aaatgggctccttctgtggtgaaggtctcatacaagggctctccagcagcaagacgagcg
ttcgtacctcagcttcgaagtggaaaattcaacgtcttgctcactacttacgaatatatc
atcaaagataagcacattcttgctaagatccgctggaagtacatgattgtggacgagggg
cacaggatgaagaaccaccactgcaagctcacgcaggtcctcaacacgcactacgtggcg
ccccgccggctgctgctcacggggaccccgctgcagaacaagctgccygagctgtgggct
ctgctcaacttcctcctgccgaccatcttcaagagctgcagcacgtttgagcagtggttt
aatgctccctttgccatgacaggagagaaggtggatctgaacgaagaagaaacaattctg
ataatccgacgtttacacaaggtgctccggcccttcctgctcaggaggctaaagaaggaa
gtcgaagcgcagctacccgagaaggtggagtacgtgatcaagtgcgacatgtcggccttg
cagagggtgctctacaggcacatgcaggccaagggagtgctcctcaccgatggctccgag
aaggataaaaagggcaaaggcggtacaaaaaccttgatgaataccatcatgcagctgagg
aagatctgcaaccatccgtacatgttccagcacatagaggaatccttttcggagcactta
ggtttcactggtggtattgtgcaggggctggatctgtaccgagcctcggggaagtttgag
ctcctggacagaattctccccaagctgcgagccaccaaccacaaggtgctgctcttctgt
cagatgacctccctcatgaccatcatggaggattattttgcctaccgcggcttcaaatac
ctcaggctggacggaacgactaaagccgaagaccggggcatgttgctaaagactttcaat
gagcccggctccgagtacttcattttcctgctgagcacccgcgcgggcgggctggggctc
aacctgcagtctgcagacactgtgatcatcttcgacagtgactggaacccccaccaggac
ctgcaggcgcaagaccgcgcgcaccgcatcgggcagcagaacgaggtgcgcgtgctgcgc
ctctgcaccgtcaacagcgtggaggagaagatcctcgccgccgccaagtacaagctcaac
gtggaccagaaggtcatccaggccggcatgtttgaccagaagtcgtcgagccacgagcgc
cgagcgttcctgcaggccatcctggagcacgaggagcaggacgagaccagatacagcgcg
ggcagcggcagtggcagtgcaagcttcccccacactgcctccaccctgtgcctgaacgct
gagttggaggaaccacctctaaaggtgagaggggaagaagatgaggttcccgacgatgaa
acggtcaaccagatgatcgcgcgccacgaagaggagtttgaccttttcatggtgagcatg
gcacaggcggcggaggagaagcgaggcctgccgttctccggggtagcggctaaaacggtc
tttctaacagaacccaactga
DBGET
integrated database retrieval system
