Nothoprocta perdicaria (Chilean tinamou): 112958808
Help
Entry
112958808 CDS
T07556
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112958808 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
112958808
NCBI-ProteinID:
XP_025908524
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MKPFENSWLFLLLAAILRVICASFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDACKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPLLDEDRVMLRLYRFTENETFAETF
TLHVKLLEPDCNIIKMRTHALEVPEYHGLSRVIDKNVLAFDYDRKINLNCTITVPTVEML
LPAHGRLVTGXMQREQPRGDQPQSFFPSSKHSLGQRCSSGNCMPGLGAIHNIKTSCEEFL
RMGIRYXHLDPPSPDIDYIPVRLDLTDIRSKTLHKTEYAWLPVQIKGAIPNQIPRAVLTA
KFSLEVDQFILTPITTTTVDAEDSETLKPLLVFNITKPPPRGFITHLSDHTKPIGSFTWK
DLSDLLIAYQPPNNSHTERRNYEVEFEXYDFYFEKSLPIIVHLSIRTADTNAPRVSWNTG
LNLLEGQSRPITWEHFQVVDNDDIQNVHLVTVGGLQHGRLTVRGQKGFMFRVSDIQAGAV
CYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPKDDSPPFLINNVVIEVHEGQTILIQ
GSMLQASDMDSSDDYILYNITKLPHAGEIMKKPGPNLIGYPVSTFLQRDLFNGIIYYHHF
GGEVFEDSLEFVLCDSHDPPNLSEPQMLMVHIIPVDDQPPREAPGVTRHLVVKETEIALL
TKKHLHFIDVEEQERELTYTITSSPFFSCRHSQLDAGKLFMVDSIPKLVKDPAVLALRSF
TQHAVNYMKVAYMPPLQDIGPEPQHVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVL
TSHVRVDEGGLSTITESHIXLSDVDTRWEQLLLVLRRQPQHGTVELDGVPVKEDDRFPCR
NLRTLSLRYRHDGSETLTDDILFVATDSIHSVEFILQVKVLPVNDELPVMRTGLVPVVHC
LEGEEVLLSSEYICATDVDSDDMKLTFTLVRQPKHGVVRKAGIAVSRFSQADVIAGLVTY
KHTSGEIGLGPSFEILVFVVSDEEAGSDVNNCCYDGPLPPPFPLHDPLTVFDLNITVLPV
DNQAPSITVGARFVVEEGSSAALTAKHLFATDPDTAADDLEFVLVSHPQFGYIENILPSP
GFEKSNIGISIASFQLKHLEALNINYVQSRHTQIEPTSDQFVLYVTDGLHHSAEKTFFVL
INPTNDEVPEFTAKNISVREGEVKELDLSVISAVDLDVPQDHLVFSVVQKPCHGFLINGI
HGNDILHYKQLITHHHSHELLVHDFSMELLMNGRKLIYMHDDSENLTDNFIIQLSDGKHK
VLXTISVEVIPVNDEKPVLSKKNDIEVNMGETRIISSAVLSAEDKDTPRERIYYVFERIP
ENGQLQXKVGRDWVTLQTGMKCTQEELDMNLVRYVHTGAIGSRNQDSFTFYLWDEYNRSP
AVDFYINVKDMEKGDIAVFIKPLRVLKGDRSYITTDALLALDGTDKPEELLYVITSPPQY
GQIEYVSYPGIPITSFTQMDVAGQIVCYVQNTKASVSEDTFRFIISNGLRTKHGTFTISL
ERVDQALPTLSRNTGLRLVEGTMALLSPDVLQLSDPDTAKENLTFLLAQVPQNGHLYYRG
AVLLQHNFTQQDVDNMDIAYKHQGGDSQIDRFTFVATDRTNQGFIVHGXVQIEPVAFTIQ
VDQMDKAAPKIVHLHCFTEVELLKNGNYGIYITARNLKASDPNTEDDKIIFKIIRGPHHG
YLENTTTGGFIHKEFSQKDLNSKTILYVISPLQEVNSDDLEFQVTDPNGNAAVPQILELW
WSRIEMQQTEYEVYENVGKVTLKITRAGYSADSAFIAVKINEISAVLGKDFTVTPSKLXQ
FDPGMSTKMWNIAITCDGLEEDDEVFEVVLSSPVNAVLGTKTKAIVKILDSKGGQCSSFH
PSGQNKHDFWGRGTLIPVSSGSSSPSRPGSIHLERIPPSPSKGVTERRGDMLQEHSLANR
SKTRLRVIGNGRIIHPSSVYRNGTDVVFKYHGMVSLRTEDDSSSAKANSKAEVSLINQAQ
PQIDTIASRKTEIPQADKAELASESSSSHQDIYFFAKPCTPDLKGLLHYEESTQRLYQCN
GIRWKFWNSQDKEMSMKKCPAGWSHHEGSCYFLVVNHKVSWNTAARXCREQYLGSLASVA
NEQHMKWLWDFAGRKPFWIGLNDQVNAGHWEWSGGEPITYINWRRGPYRIPKRGKNCVLV
QKRGKWQATDCRKIKQNSYICSRKL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgaaaacagctggttgtttctactgctggctgctatcctgagagtcatc
tgtgcctcctttatcagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaagacgcctgcaaagtggaa
gttgtgattaatgagccaataactcagagggttgggaagctgactcctcaggtgtttgac
tgccacttccttcctaatgaagtcaagtatacccataacggctgcccgcttctagatgaa
gacagggtcatgctcaggttgtacagatttacagaaaatgagacatttgcagaaacattc
acccttcacgtgaagttgcttgaaccagactgcaacatcatcaaaatgcgcacccatgct
ctggaggtccctgagtaccatggcctgtccagggtgatcgacaagaacgttcttgctttt
gactatgacaggaagataaacctgaactgcaccatcaccgttcccactgtggagatgctc
ctgcctgctcatggtcgcctggtcaccgggraaatgcagagagagcagcctcgtggagac
cagccccagagcttcttccccagctccaagcatagcctgggccagcggtgcagcagtggg
aattgcatgccaggactgggagcgattcacaacataaaaacgagctgtgaagagtttttg
aggatgggtatccgataccrgcatctcgaccctccctcacctgacatagactatattcct
gtcagacttgatctcacagacattagaagcaaaactttgcacaagactgagtatgcatgg
ctccctgttcagattaaaggtgctattcccaatcaaatccccagagctgtcctgacagca
aagttcagcctggaggtagaccagtttattttaacacccataactaccacaactgttgat
gccgaagacagtgaaacactgaagcccctgcttgtcttcaacattaccaagccacctcca
cggggcttcatcactcacctatcagaccacacaaaaccgataggctccttcacatggaaa
gacctcagcgacctgctcattgcttatcagcctccaaacaacagccacacagagaggagg
aactatgaggtggagtttgagrtttacgacttctactttgaaaagagtctgccaatcatt
gtgcatctttctatcagaacagcagatacaaatgctcctcgggtttcatggaatacaggc
ctcaaccttttggaaggacaatcgcgaccaatcacatgggaacacttccaagttgtagat
aatgacgacatccaaaacgttcacttggtcacagtaggtggcttgcaacatgggcgtctc
acagtgagaggacagaaaggattcatgttcagagtctctgacattcaggcaggggctgtt
tgctaccatcatgatgacagtgactctacgaaggattttgtggtgtttaggatttttgat
ggcctccacagtattcgccataaattcccaatcaatatccttcctaaagatgacagtcct
ccatttcttatcaacaatgtggtaattgaggtccacgaaggacagacaatcttgatccaa
ggctctatgcttcaagcctctgacatggactccagtgacgattacatattatataatatt
accaagctaccgcatgcgggagaaatcatgaagaaaccaggaccaaacctgattggatat
cctgtcagtactttccttcagagggatctatttaatggaataatttattatcatcatttt
ggaggagaagtatttgaagattcccttgaatttgtcttatgtgacagccatgaccctccc
aatctctcagagcctcagatgctgatggtgcacattatccctgtggatgatcagccaccc
cgagaggccccaggagtgacacgtcacctggttgttaaggagactgagattgctcttcta
actaagaaacatctccacttcatagatgtggaggaacaagaaagggaactcacgtacacc
ataacctcttccccatttttttcttgtagacacagccagttagatgctgggaagctgttt
atggtggactccatccccaaactggtcaaggatcctgctgttcttgcgctgaggtcattt
actcagcatgctgtgaattatatgaaagttgcctacatgcccccactgcaggacataggg
cctgaacctcagcacgttcagtttatattttctgtcagtaatcaacacgggggcactctc
tatgggatctgctttaatattacgattcttccagtggacaaccaagcaccagaggtgttg
acgagccacgtgagagtggatgagggtggcctgagcacaatcacagagagccacattcrc
ctctcagacgtggacacaagatgggagcagctcctgcttgtgctgcggagacagccgcag
cacggcacagtggagctggatggtgttcctgtgaaggaagatgacaggtttccctgcagg
aacctgcgcaccctgtcactcaggtacaggcatgatggctctgagacacttactgatgat
atcctctttgtagccactgacagcattcattcagtagagttcatattgcaggtcaaggtg
ctgcctgtgaacgatgagcttcctgttatgcgaacaggccttgttcctgttgttcactgc
ctggagggtgaagaagtgctcctttcctcagagtacatttgtgcgacagatgtagacagt
gacgacatgaagctcacgttcacactggttcgccagcccaagcacggggtggtgaggaaa
gcgggcatcgctgtgagtcgtttttcccaagctgatgtcatcgctggcttggtcacatac
aaacacacaagtggggagattggcctgggtccttcctttgagatcttagtctttgttgtg
tctgatgaagaagctggctcagatgtgaataattgctgttatgacggacctcttcctcca
ccatttccacttcatgatccattgacagtatttgaccttaacatcactgtacttccagtg
gacaaccaggctccatccatcacagttggtgcaaggtttgtggtggaggagggctcctcg
gcagccctcaccgctaagcatttgtttgccactgaccctgataccgctgccgatgactta
gagtttgtcttggtttctcatcctcagtttggttacattgaaaatattctgccttctccc
gggtttgagaagagcaacattggtataagcatagcatcctttcagctgaaacatctggaa
gccttgaatataaactatgtacagtccaggcacacgcagattgagccaacgtcagaccag
tttgtgctttatgtcactgatgggctgcatcactcagcagagaaaacattttttgtgctg
atcaacccaaccaatgatgaagttccagaattcacagcaaagaatatttctgttcgggag
ggtgaggtgaaagagctggatctctctgttatcagtgcagttgatctggatgtacctcag
gaccatttggtattcagtgttgtgcagaagccctgtcatgggtttctcattaacggaatt
catggcaatgatattctacattacaaacagttaattactcatcaccacagccatgaactt
cttgttcatgacttttccatggagctacttatgaatggaaggaagctgatatacatgcat
gatgactcagaaaacctcactgacaactttataatccagctatcagatgggaaacataaa
gttctcaraaccatttcagtagaggtcattcctgttaatgatgagaaaccagtgctgagc
aagaagaacgatatagaggtgaacatgggtgaaacccgaatcatttctagtgctgttctg
tcagctgaagataaggatacccccagggagcgaatttactatgtatttgaaagaattcca
gaaaatgggcagcttcaackcaaggttggcagagactgggtgacactccaaactggaatg
aagtgcacgcaggaagaactagatatgaaccttgtgagatatgtccatacaggagctata
gggtccaggaaccaagacagcttcacgttttatctatgggatgagtacaacagatcccca
gctgtggacttctacataaatgtaaaggacatggaaaagggagatattgctgttttcata
aaacctcttagagtgctgaaaggggatcggagctacattacaacagatgccctccttgcc
ttggatggaacagacaagccggaagagctcctttacgtgataacctctccacctcagtat
ggacaaatagagtatgtcagctatcctggcatccccattaccagcttcactcaaatggat
gtagcaggccagatagtctgctatgttcaaaacactaaggcatctgtttctgaggataca
ttcagattcatcatcagcaatggactgaggactaagcatgggacattcaccatctccttg
gagagagtcgaccaagctttacccactctgtctagaaacacggggttaagattagtggaa
ggcaccatggcactcctttctcctgatgtcctgcagctttcagacccagacactgccaaa
gaaaaccttaccttcctcttggctcaggtcccccagaatggtcatctgtattatcgaggg
gctgtgctactgcagcacaacttcacccagcaagatgtggacaacatggatattgcatat
aaacaccaaggcggtgattcccagattgacagatttacatttgttgcaacagataggact
aatcaaggcttcatcgtgcatgggarggtgcagatcgagccagtggcattcaccattcag
gtggatcaaatggacaaagcagcaccaaaaattgttcatctccattgctttactgaagta
gaactcctgaagaatggcaattatgggatctatattactgcaaggaacctgaaggcatct
gatcccaatacagaagatgacaaaataatttttaagattatacgaggtcctcatcatggc
tacttggaaaatacaaccacaggtggctttatccacaaagaatttagccaaaaggattta
aatagtaaaaccatactttatgtcatcagtccactgcaggaagtgaattcagatgacttg
gagtttcaggtcacagatcccaatggaaatgcagcggttccccaaatattagaactttgg
tggtctcgtattgaaatgcaacagactgaatatgaagtgtatgagaatgtaggaaaggtg
acattgaaaatcaccagggcaggatactctgcagactctgcttttattgcagtgaagatc
aatgaaatatctgcagtgctgggtaaggactttacagtgactccctctaagctcrttcag
tttgatccaggaatgtcaaccaagatgtggaatatagcaattacctgtgatggactagag
gaagatgatgaagtctttgaagtagttctgagctcccccgtgaatgctgttcttggcact
aagacaaaagccatagtgaaaattttggactcaaaaggaggtcagtgcagctctttccat
ccctctggccaaaataagcacgacttctggggaagaggcacgctgattccagtttcctca
ggctcctcatcaccttccaggcctggcagcattcacttggaaaggatcccgccatctcct
tccaaaggggtgacagagcgtagaggggacatgctgcaggagcacagcttggcaaatcgg
tcaaagaccaggctgagagtgattggaaatggcagaataattcatccctcatctgtatay
agaaatggaaccgatgttgttttcaaataccaygggatggtgtcgctcagaacagaggat
gactcctcatcagccaaagcaaacagcaaggctgaagtgtcattaattaaccaagcacaa
ccacagatagatacaatcgcctctaggaagacggaaatcccacaagctgataaggcagaa
ttggcatctgaatcaagctctagccatcaggacatctacttttttgcaaagccctgtacg
ccagatttaaaaggcctcttgcattatgaagaaagcactcaaaggctctatcagtgcaat
ggaataagatggaagttctggaattcccaagataaggaaatgagtatgaaaaaatgtcct
gctggatggagtcatcatgagggcagctgctatttcctggtagtgaatcacaaggtctcc
tggaatactgctgctcggkcttgtagagaacagtacctggggagcctggcaagcgtggct
aacgagcagcacatgaagtggctgtgggacttcgctgggaggaagcccttctggataggc
ttgaatgaccaagtgaatgctggacattgggagtggagtggtggagaacccatcacctat
ataaactggagaagaggcccctatcgtattcctaagagagggaaaaactgtgtgttggtg
cagaagcgagggaaatggcaagcaacggactgccggaagatcaaacagaacagctacata
tgctcaagaaagctgtga
DBGET
integrated database retrieval system
