KEGG   Natrinema pallidum: FGF80_01740
Entry
FGF80_01740       CDS       T06072                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
npl  Natrinema pallidum
Pathway
npl03030  DNA replication
npl03410  Base excision repair
npl03420  Nucleotide excision repair
npl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:npl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FGF80_01740
   03410 Base excision repair
    FGF80_01740
   03420 Nucleotide excision repair
    FGF80_01740
   03430 Mismatch repair
    FGF80_01740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npl03032]
    FGF80_01740
   03400 DNA repair and recombination proteins [BR:npl03400]
    FGF80_01740
Enzymes [BR:npl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FGF80_01740
    6.5.1.6  DNA ligase (ATP or NAD+)
     FGF80_01740
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     FGF80_01740
DNA replication proteins [BR:npl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FGF80_01740
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     FGF80_01740
DNA repair and recombination proteins [BR:npl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FGF80_01740
   NER (nucleotide excision repair)
    Other NER factors
     FGF80_01740
   MMR (mismatch excision repair)
    Other MMR factors
     FGF80_01740
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: QCW02036
UniProt: A0A4P9TBL7
LinkDB
Position
374144..375880
AA seq 578 aa
MEFATFADRAATIDAEPADLEIVAHVRDLLADAGSDLEIVARFAQGRVFPAWDSTTLDIG
PSACYEAIARAAGRNVSSDDVEERLAEMGEIGDVAASYEFGGQQGLGAFTGDDSSATGGD
LTVREVADTLAELAAAEGSGSHDRKVDLLFGLFNRASSEEARYLARLVLSEMRIGVGEGT
VRDAIAAAFDVPEDGVERALQVSNDYGRVARIARDEGLAGLEAMELDVGRPVQAMLAQAG
TVTDALEEWGTAAVEWKYDGARIQLHHDPAGMDDGDGSTVETRVFSRNMEDVTDALPEVV
EFAAETLDAPAILDGEVVAVDDDGSPLPFQEVLKRFRRKHDVAKAREDVSVRPVFFDCLH
VGGEDLLAEPLTTRHDGLRSVLADSGTDGDAGDAVADEDIEGLSLLWTTDDPDEIESIDA
GALEAGHEGIMLKDPGSTYSPGRRGKHWRKRKPDVETIDCVVTGAEWGEGRRATFLGTFE
LAVRTGDDFETVGKVATGITDEKLAELTDLLEPHIAAENGQEVDLEPEVVFEVGYEEIQS
SPTYSSGYALRFPRFQGVRYDKDPEGADSLERLQRLQA
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgccgaccgcgccgcgacgatcgacgccgaacccgcagacctc
gagatcgtcgcccacgtcagggacctgctcgccgatgccggctccgacctcgaaatcgtg
gcccgcttcgcacagggccgggtgttcccggcctgggactcgacgacgctcgatatcggt
ccgagcgcgtgttacgaggcgatcgcccgcgcggcggggcgaaacgtcagcagcgacgac
gtcgaagaacgactcgccgagatgggcgaaatcggcgacgtagcggccagctacgagttc
ggcggccagcagggtctcggcgcgttcacgggcgacgatagcagcgcgaccggcggcgat
ctcaccgtccgcgaggtcgccgacacgctcgcggagctggccgccgccgaggggtcgggc
agccacgaccggaaggtcgatctgctctttggcctgttcaaccgcgcctcgagcgaggag
gcgcgttatctcgcccgtctcgtcctctcggagatgcgcatcggcgtcggcgaagggacg
gtacgggacgccatcgccgcggccttcgacgtccccgaggacggcgtcgaacgcgccctg
caagtgtccaacgactacgggcgggtcgcccgcatcgcccgggacgagggacttgcgggt
ctcgaggcgatggaactggacgtcggccgccccgtccaggcgatgctcgcacaggccggg
accgtgaccgacgccctcgaggagtgggggacggccgcggtcgagtggaagtacgacggg
gcgcggatccagttgcaccacgaccccgcgggtatggacgacggtgacggctcgacggtc
gagacccgcgtcttctcgcggaacatggaggacgtcaccgatgccctccccgaggtcgtc
gagttcgccgcggaaaccctcgatgcccccgcaatcctcgacggcgaggtcgtcgccgtc
gacgacgacggctcgccgctgccgttccaggaagtcctcaagcggttccgccggaaacac
gacgtcgcgaaggcccgcgaggacgtctcggtgcgcccggtcttcttcgactgcctgcac
gtcggcggcgaggacctgctcgcggaaccgctgacgacccgccacgacgggctccggtcg
gtgctggccgattccggtaccgatggcgatgcgggcgacgcggtcgcggacgaggacatc
gagggtctctccctgctctggaccaccgacgaccccgacgagatcgagtcgatcgacgcc
ggcgcgctcgaggccggccacgaggggatcatgctcaaggaccccgggtcgacatattcg
ccggggcgacgggggaaacactggcgcaagcgcaagccggacgtggaaacgatcgactgc
gtcgtcaccggtgccgagtggggcgagggccgacgggcgaccttcctcgggaccttcgaa
ctcgccgtgcgcacgggcgacgatttcgagaccgtcggcaaggtcgcgaccgggatcacc
gacgagaaactcgcggaactgaccgacctgctcgagccacacattgccgccgagaacgga
caggaagtcgacctcgagccggaagtcgtcttcgaggtcggctacgaggagatccagtcc
tcgccgacctactcctcgggctatgcgctgcggttcccgcggtttcagggcgtgcgatac
gacaaggaccccgagggcgcggactcgctcgagcgcttacagcgcctgcaggcgtga

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