Novosphingobium pentaromativorans: JI59_11435
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Entry
JI59_11435 CDS
T03399
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00061
Fatty acid biosynthesis
npn00071
Fatty acid degradation
npn01100
Metabolic pathways
npn01212
Fatty acid metabolism
npn02024
Quorum sensing
Module
npn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JI59_11435
00071 Fatty acid degradation
JI59_11435
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI59_11435
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
npn01004
]
JI59_11435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npn04147
]
JI59_11435
Enzymes [BR:
npn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JI59_11435
Lipid biosynthesis proteins [BR:
npn01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
JI59_11435
Exosome [BR:
npn04147
]
Exosomal proteins
Exosomal proteins of breast milk
JI59_11435
Exosomal proteins of breast cancer cells
JI59_11435
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIT80346
LinkDB
All DBs
Position
complement(2378407..2380092)
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AA seq
561 aa
AA seq
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MDERIGPRAWRESYAHPCDWQQDFAPLAMPQMFAGSVAAYGERVLADFLGRTFTYRQIDA
EARRFACGLQSLGLGKGDRIGLFLPNVPCYLSAYFGAFMAGVTVVNFSPLYTATELEAQV
ADSGARLLVTLDVPALLPTACKVHRESALEWLVVARLSSMLPFWKSLGLRLLRRKDIAAI
PREEGVFEFTDVLHEGDLAPVDIEPMTDLAMLQYTGGTTGTPKGAMLTHQNLTVNARQIE
EIDPHAHARDVIVGVLPFFHVFANATVLNRTVYDGGTIAMLPRFDAGQCLATLQRVKATA
MPGVPTMYQALLDHPDMARTDFSSLFTCISGGAPLPGPVKARFEQASGATLVEGYGLTEA
AGVVATNPFDGPERPGTIGHPMPGTDLRLLDKDDPTRAAASGEPGELAINGPQVMAGYWN
RPEAASAVFVELEGKRWLRTGDIATIDEDGYVHLIDRSKDMIAVGGFKVFPSQVEEILLA
NPAVREAMVLGVPDEYHGEVPRAYVVAESGEAASAEDIAAWLNERVGKHERVDKVVLRDS
LPKTMVGKLDRKALRAEVLGK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaggatcggtcccagggcctggcgggaaagctatgcgcacccttgcgactgg
cagcaggatttcgccccgcttgccatgccgcagatgttcgcgggcagtgtggcggcttac
ggtgagcgggttctcgccgactttctcgggcgcacgttcacgtatcggcaaatcgatgca
gaggcgcgtcgcttcgcctgcggcttgcaatcgctggggctgggcaagggcgaccggatc
gggctcttcctgcccaacgtgccctgttacctgtcggcctacttcggcgccttcatggct
ggcgttaccgtcgtcaacttctcaccactctacacggctacggaactggaagcgcaagtt
gccgattccggggcgcgcctgctggtgacgctcgacgttcccgctctcctgccgacggct
tgcaaggtgcaccgcgaatcggcgcttgaatggctggtggtcgcgcgtctctccagcatg
ctgccgttctggaaaagccttggcctgcgcctgcttcgccgcaaggatatcgccgctatc
ccgcgcgaagaaggcgtgttcgaatttaccgacgtgctgcatgaaggtgaccttgcgccg
gtcgatatcgagccgatgaccgaccttgcgatgctccagtataccggcggcacgaccgga
acacccaagggcgcgatgctcacccaccagaatctcacggtgaacgcgcggcagatcgaa
gagatcgatccccacgcccatgcgcgcgacgtgatcgtcggcgttctgcccttcttccat
gtctttgccaatgcgacggtgctgaaccgcacggtctatgatggcggcaccatcgccatg
ctgccgcgcttcgatgccgggcaatgcctggccacgctgcagcgggtgaaagcgacggcg
atgcctggcgtgccgacgatgtaccaggccctgctcgatcatcccgacatggcccggacc
gatttctcaagcctgttcacctgcatttccggtggggcgccgctgccgggcccggtcaag
gcgcgctttgagcaggcgagtggcgcgaccttggttgaaggctacgggctgaccgaggcc
gccggggttgtcgccaccaatcctttcgacgggccggaacgaccgggaaccatcggccat
cccatgcccggcacggacctgcgcctgctagacaaggacgatcccacgcgtgcggcagcc
tcaggcgagccgggtgaactggcgatcaatggtccgcaggtcatggccggctactggaat
cggcccgaggccgcgtccgcggtcttcgtcgaactggaaggcaagcgctggctgcgcacc
ggtgacatcgcaacgatcgatgaggacggctatgtccaccttatcgaccgcagcaaggac
atgatcgccgttggcgggtttaaggtctttcccagccaggtggaggaaatcctcctcgcc
aatcccgccgtgcgcgaagcgatggtgctgggcgtgcccgacgagtatcacggtgaagtc
ccgcgcgcctatgtggtcgccgaaagcggtgaggctgcgagcgccgaagacatcgccgcc
tggctcaacgagcgggtcggcaagcatgagcgcgtcgacaaggtggtcctgcgcgattcg
ctgccaaagacgatggtcggcaagctcgaccgcaaggcgctgcgtgccgaggtgctgggc
aagtag
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