Novosphingobium pentaromativorans: JI59_18120
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Entry
JI59_18120 CDS
T03399
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn03030
DNA replication
npn03430
Mismatch repair
npn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI59_18120
03430 Mismatch repair
JI59_18120
03440 Homologous recombination
JI59_18120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npn03032
]
JI59_18120
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_18120
Enzymes [BR:
npn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI59_18120
DNA replication proteins [BR:
npn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI59_18120
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI59_18120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AIT81551
UniProt:
G6E7S3
LinkDB
All DBs
Position
3743454..3743891
Genome browser
AA seq
145 aa
AA seq
DB search
MRVDFYQLSRDPAEVALPLIAGKVIGSGERLLVVSADGEQRKRIRQALWSAGPDTFLANG
EVGDGQEERQPILLSDAPQPANGAKFMAIADGQWREGSEPFARTFYLFDESTVQQARGVW
RELRSREAVEHYYWKQEGGRWIQAG
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcgatttctaccagctcagccgcgatccagccgaagtcgcactgccgctgatc
gcgggcaaggtcatcgggtcgggcgagcgcctcctggtggtctccgctgacggcgagcag
cgcaagcggatccggcaggccctgtggtcggctgggcccgacacgttccttgccaatggc
gaggttggcgatggacaggaggaacgccagccgatcctcctgtccgatgcgccgcaaccg
gccaacggggcgaagttcatggccatcgccgacgggcagtggcgtgaaggcagcgaaccg
tttgcgcgcaccttctatctcttcgacgaatcgacggttcagcaggcccgcggcgtctgg
cgcgaactgcgctctcgcgaagccgtggagcactattactggaagcaggaaggcggccgc
tggatccaggccggataa
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