Nyctereutes procyonoides (raccoon dog): 129507878
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Entry
129507878 CDS
T09008
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npo03009
]
129507878 (DDX55)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129507878 (DDX55)
Ribosome biogenesis [BR:
npo03009
]
Eukaryotic type
Pre-60S particles
Helicases
129507878 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ANAPC15
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
129507878
NCBI-ProteinID:
XP_055178614
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MEHVTEGSWESLPTQLHPQVLGALRQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGG
RNPAEDVSRFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMICKADEKFNQLVHFLRNHKQEKHLIFFSVQVCVAVTVLAFYSCLSPHGLKMAS
VMPAFPSALKTEKGEKAEGVGRAFFTSEEQKAFSETPPSQLTQALSLGAKALGHSKWPVT
LSLLSPLGSTCACVEYYGKALEALVKSVKIMCIHGKMKHKRNKIFMEFRKLQSGILVCTD
VMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSALVFLLPMEESYVTFLEIN
QKCPLQEMKLQKNTGDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDL
DFASLARGFALLRMPKMPELRGRQFPDFVPADVNTDIIPFKDKIREKQRQKLLERQRKEK
RENGGRKNIIKNKAWSKQKAKKEKKKRMNEKRKREEGSDIEDEDMEELLNDMRLLKKFKK
GKITEEEFEKGLFSCGKGTVTTDLGIPDLEEDC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacagagggttcctgggagtcgctgccgacgcagctgcacccgcaggtg
ctgggtgcgcttaggcagctgggttttccgcacatgacgccggtgcagtctgcaaccatc
cctctcttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaacg
cttgcttttgtcatccccatcctggagattcttctgagaagagaagagaagttaaaaaag
aatcaggtcggggcgatcatcatcacacccacccgagagctggctattcaggtagatgaa
gtcctggcgcatttcacaaagtccttcccacagttcagccagattctctggatcggaggc
aggaatcccgcagaagatgtttccaggtttaaggaacaaggtgggaacatcattgtggcc
actccaggccgcttggaggacatgttccggaggaaggtggagggcttggatctggctagc
tgtgtgaagtccctggaggtcctggtgttggatgaagcagacagacttctggacatgggg
tttgaggcaagcatcaacaccatcctggagtttttgccaaagcagaggagaacaggcctc
ttttcagcaactcagacacaggaagtggagagcctggtgagagcgggcctgcggaaccct
gtccggatctcggtgaaggagaagggtgtagctgccagcagcacccagaaaactccttcc
cgcctggagaactactacatgatatgtaaggcagatgagaaatttaaccagctggtacat
tttcttcgaaatcataagcaggaaaaacacctgatcttcttcagtgtccaggtctgtgtt
gctgtgactgtcttggccttttattcctgtttgtcccctcatggtctgaagatggccagt
gtcatgcctgctttcccatctgcactgaaaacagagaaaggagaaaaggcagagggagtg
ggaagggcattcttcacatcagaagagcagaaagctttctcagaaacccctccttcccag
ctgactcaagctttatctttaggggccaaagcactagggcactctaagtggccagtgact
ctgagcctgctgtcccctctcggcagcacctgtgcctgtgtggaatactacggaaaggcc
ctggaggccctggtgaagagtgtgaagattatgtgcattcacgggaagatgaaacacaag
cgcaataagatcttcatggagttccgcaaattgcaaagtgggattttagtgtgcacggat
gtcatggctcgaggaatagacattcctgaagtaaactgggttttgcaatatgaccctccc
agcagcgcaagtgcctttgtgcatcgctgtggccgcacagcccgcattggccacggtggc
agcgcgctcgtgttccttcttcccatggaagagtcctatgtcactttccttgaaattaac
caaaaatgtcccctgcaggagatgaagctccagaaaaacacaggagatctccttccaaag
ctcaagtccatggccctggctgacagagctgtgtttgaaaagggcatgaaggcctttgtg
tcatatgtccaggcttatgcaaagcacgaatgcaacctcatcttcagattaaaggatctt
gattttgctagtcttgctcgagggtttgccctgctgcggatgcccaagatgccagaactg
aggggacggcagttcccagattttgtgcctgcagatgttaacacagacatcattccattt
aaagataaaattagagagaaacaaaggcagaaactactggagcgacaaagaaaagagaaa
agagaaaatggagggaggaaaaatattataaaaaataaagcttggtcaaagcagaaggcc
aaaaaggagaagaagaaaagaatgaatgaaaaaaggaagagggaagagggttctgatatc
gaagatgaggacatggaagaacttcttaacgacatgaggctgttgaaaaagtttaagaaa
ggcaaaattactgaggaagaatttgagaaggggttgttttcatgtggcaagggaacagtc
acgacagatttggggatccctgatttggaagaggactgctga
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