Nyctereutes procyonoides (raccoon dog): 129516583
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Entry
129516583 CDS
T09008
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03013
Nucleocytoplasmic transport
npo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129516583 (UPF3A)
03015 mRNA surveillance pathway
129516583 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129516583 (UPF3A)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129516583 (UPF3A)
mRNA cycle factors
P-body specific factors
129516583 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
129516583
NCBI-ProteinID:
XP_055192049
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MRSEKEGVGGPGAAVPGRGPGGREKRSAVEVQFRRESPWRGGEARPGLSFGGGVGTGKPR
EEKTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFELFAADCSLYPHLYSRAYINFRNP
EDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFL
ETYCVEEEKPNANPETLLGDIEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKREERRR
RELEKKRLREEEKRKKREEESCKRKEADREKRAAERQVRIKLLKKPEKGEEPTEKPKERG
EEVDVGDGKQEMSLSYAVLKPMPLESSLEKPRKKSQNDSDMEQREMERRLRAKEPATQRC
HMDGSMHRVHCEFNRFARRNEEEPRWGKGVPPVRGKKGNQDSSIPVEAAEWPGREHKSEG
GLAPSMEHPGNKDLLALQLYQPEAHIRAQESGGGISVEGRDGSRGEAEDLALAGSQKSEE
AGEEKMLQEKEDQLLRLHGEKWSFSDSRNQRRPSFCVST
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagagaaggagggggtcggaggccctggcgcggcagttcctgggcggggcccg
ggcgggagggagaagcggtccgctgtggaagtccagttccgccgggagtcgccgtggcga
ggaggagaggcacgcccaggcttgtccttcggcggtggggtcggtacgggcaaacctcgc
gaggagaagacggttctgagcaaggtggtcatccggcggcttcctcccagcctcaccaag
gagcagctggaagagcagctgcacccactgcccgcgcacgattacttcgagctcttcgcc
gccgactgcagtctttatcctcatctctactcaagagcatacattaattttagaaatcct
gaggacatccttctttttagagatcgttttgatggctatatcttcattgacagcaaaggc
ctagaatatcctgcagtggtagaatttgccccattccagaagatagccaaaaagaagcta
aagaaaaaagatgccaaaactggaagcattgaagacgatccagaatataagaagtttttg
gaaacttactgtgtggaggaagagaaacctaatgcaaatcctgaaactcttctgggagac
atagaggcaaagacaagagaacttattgctagaagaactacacctcttttggaatatatt
agaaatagaaaattagagaagcagaggattcgagaagagaagcgagaagagcgaaggagg
agggaactggagaagaagcgtttacgggaagaagaaaagaggaagaagagagaagaggag
agttgtaagaggaaagaggcagacagagagaagagagctgctgagagacaagtaaggatt
aagcttcttaagaaaccagaaaagggggaggaaccaactgagaagccaaaggaaagagga
gaggaagtggatgtaggagatgggaagcaggagatgagtcttagctatgctgtcctgaag
cccatgcccttggagagctcgctggagaagcccaggaaaaagtcacagaatgatagtgac
atggagcaaagagagatggagagaagacttcgagcaaaggagcctgcgacacaaagatgc
cacatggatggcagcatgcacagagtgcactgtgagtttaacaggtttgcaaggagaaac
gaagaagagccgagatgggggaaaggagtccccccagtccgagggaagaaggggaaccag
gacagtagcatccctgtggaggcagcagagtggcctgggagagaacacaagagtgaaggt
ggcctagcacccagcatggagcacccaggaaacaaggatttgctggccttgcagctgtac
caaccagaagctcacatccgagcacaagaaagtggtgggggaatctctgttgagggccgt
gatgggagcaggggcgaggctgaagatttggcactggctggttcccagaagagtgaagag
gcaggggaagagaagatgcttcaggagaaagaagaccagctcctgaggcttcacggtgag
aagtggagtttcagtgattctagaaaccaaagaaggccaagtttctgtgtttctacctag
DBGET
integrated database retrieval system
