Nanorana parkeri (Xizang Plateau frog): 108784712
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Entry
108784712 CDS
T04897
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108784712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108784712
Spliceosome [BR:
npr03041
]
Complex A
U1 snRNP components
U1 related factors
108784712
Complex B
108784712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
Motif
Other DBs
NCBI-GeneID:
108784712
NCBI-ProteinID:
XP_018409095
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MLHQGLAEENVSPAFVEWWTSWCWACVMSVIRLGCGALGVQGVDVSGDASPFALASVLVG
RPGFQVGSSGTALYWGPVRGSQSLPDAPASPSPHEGRAPTPGPGVGGRLRLFADFWLSHV
SDSGVRGLVSSGYKIEFLSRPGNRFFPSNTRLSPSRVVGRRRGPVCRLIVLELRAIRLSL
LHWSARLLGLAVRVQSDDATAVAYINHQGGTRSVARVERCSGFCPGRNIEFWLSRRSTSR
EWTIATGSTALDLFKFYVEGLKARYHDEKKIIKDILRDKSFVVELRTSFEDFVTVISSTK
RATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIEADSLW
EEVRERFNKEPAFEDITLEAERKRIFRDFVHTIEHECLHHHSKNKKHSKKSKKHHRKRSR
SRTGSESEDEEENHTKKKRQRSDSRSGSEHSSSGESEKSYKKSKKHKKKNKKRRHKSNSP
DSEVEKERDRKDRDKDDKERSRQKESKQKSPKRKATKEKDSANWDTSGSELSEGELEKRR
RTLLEQLDDDQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttacatcagggtcttgcggaggagaacgtctcccccgcctttgtggaatggtggacc
agttggtgctgggcctgcgttatgtctgtgattcggcttggatgcggcgcccttggtgtc
cagggtgtcgatgtcagcggtgacgcttcgccgtttgctctggcttcagtgctggtcggc
agaccaggcttccaagtaggctcttcaggaactgccctttactggggacccgtccgtggc
agccaaagtctgccagacgcgccggcaagccccagtccgcatgaaggtcgggccccgact
ccgggtcccggggtggggggccgccttcggctcttcgcggatttttggctgtcccacgtc
tccgactctggggtccgggggctggtttcttcgggctacaagatcgagtttctgtcccgt
ccgggcaaccgtttcttcccatccaacacgcgactatccccttcgcgggtcgttggtcgc
cggaggggtcccgtctgtcgattaattgtgttggaacttcgggcgattcgcctatctctt
cttcattggtcggcccggctcctgggtctggcggtccgggtccagtcggacgacgccacc
gcggtggcgtacatcaaccaccagggcggcacgagaagcgtggcccgggtcgagaggtgt
tcgggattctgtcctgggcggaacatcgagttctggctctctcggcgatctacatcccgg
gagtggacaattgcaacaggatccacagcattagacctattcaaattctatgtggagggt
ctgaaggctcggtaccatgatgagaaaaagatcatcaaagatattttaagggacaaaagt
tttgtagttgagcttcggacaagttttgaagattttgttacggttatcagctcaacaaaa
agagccactacattagatgctgggaatatcaaacttgcttttaacagtcttttagagaaa
gcagaggcccgggagcgagaacgtgagaaggaagaagctaggaaaatgaaaaggaaggaa
tctgctttcaagagtatgttaaaacaagcagccccacctattgaagcggactctttatgg
gaagaggttcgggagaggtttaataaggagccggcatttgaagatatcacactggaagca
gaacggaaaaggatattcagagattttgttcataccatagagcatgaatgtctgcatcat
cattcgaaaaacaagaaacactcaaagaaatcaaagaagcatcatcgaaagaggtctcgc
tcgcgtacaggctctgaatccgaggatgaagaggagaaccacacaaaaaagaaaaggcaa
agatcggactcccggtcaggctccgaacattcctccagtggagaatcagaaaaaagttat
aaaaagtcaaaaaagcacaaaaagaagaataagaagaggagacataaatctaattctccg
gattctgaagtagagaaggagagagatagaaaagacagagacaaggacgacaaggaacga
tcgaggcagaaggaatcaaaacagaaatctccaaaaaggaaagcgacaaaggaaaaggat
tctgctaactgggacacatccggaagtgaattaagtgaaggggagttggagaagagaaga
cggaccctcctggagcagctggatgatgatcaataa
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