Nanorana parkeri (Xizang Plateau frog): 108786114
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Entry
108786114 CDS
T04897
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npr01002
]
108786114 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108786114 (USP47)
Enzymes [BR:
npr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108786114 (USP47)
Peptidases and inhibitors [BR:
npr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108786114 (USP47)
Ubiquitin system [BR:
npr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108786114 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
108786114
NCBI-ProteinID:
XP_018410839
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MGCALASLTAAISPLIASAAGRVFAQHVPRLTPPADRRMVPGEDGQPVPREGLFWSCRQS
IFNEMKKKFSQIENAADEPRVLCIVQDTTNCKTINERITLNLPASTSVRQLFQDVAGKVG
YVSATFSLKWGNAAGTGDMTELDPSPDQSLLDAGFEAGKKNFLHVTDKNGEQPQLTSDES
GTADSSGVDDSAQEKFIGPLPRDGSVGCTSDYVSQNYSYSSLLNKSDTGYVGLVNQAMTC
YLNSLLQTLYMTPEFRNALYKWEFEDPEEDPVNSIPYQLQRLFVLLQTSKKRAIETTDVT
RSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECSYE
SWRIDTFLDIPLVIRPYGSSTAFGSVEEALHAFIQPETLDGPNQYFCERCKKKCDARKGL
RFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTDS
GAENEGSCHSDQMSNDFCTDDALDEGICLESNNSVEKLNKSSEKNCVYELFSVMVHSGSA
AGGHYYACIRSFSDDQWYSFNDQHVCRITQEDIKKTYGGSTGSRGYYSSAFASSTNAYML
MYRLKNPTKNAKFLEVSEFPEHIKRLMQREKEQEEEEKRQREIERNTCKLKLFCMHPVKQ
IRMENKLEVHKDKTLKEAVEIAWKIMDLEGVVPLDCCRLVKYDEFHDYLERSYEDEEDRP
MGLLLGGVKSSYMFDLLLETKRPDQVFQSYKPGEVMVKVYVVDLKVEAVAPPVSVRAYLS
QTIQEFKQLISKTIDLPPDPMRIVLERCYNDLRLLSVPNKTLKAEGFFRSNKVFVESSDS
TDHQLPFPESRLWKLLDRHANTIRLYVSLPEHVPVAQRSSSAKSCRDWENQAAFCERGKG
GGKSVDAILEESTEKLKSLSLQQQEEGGNGDSSKSTEGSDFENIDSPLNEADSSGSADNR
ELENRILPADSENNFQSEERSDSDINNDRSTSSVDSDILSSSHSSDTLCNADNAPIPLAN
GLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEYDESGKRRGEAQFVYFKAEMHSGEE
GSGEGQKCLLVNVDKRITLSAFKQQLEPFVGVPSSQFKVFRVYASNQEFESVRLNETLSS
FSDDNKITIRLGRALKKGEYRVKVFQLLIINDPEPCKFLLDAVFAKGMSVRQSKEELIPQ
LREQCGLDLSVDRFRLRKKTWKNPGTVFLDYHVYENEISISSNWEVFLEVLEEGEKMKSM
SQLSLLTKRWRPSQLKLEPFQEIVLETNSVDELREKMCEISSILMENLEFAKGRGTFPCD
ISVLEIHQDLDWNPKVSTLNAWPLYISDDGAVIFYRDKTEELVELTDEQRNELMKKESSR
LQKTGHRVTYSPRKEKALKIYLDGASSKDATQD
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgctctcgcgagtcttacggcggccatttctccattgattgcgtctgctgct
ggcagggtcttcgctcagcatgttccccgtttgacgccacccgccgaccgtagaatggtt
cccggagaggacggtcagcccgtcccccgagaggggttgttttggagttgcagacagagc
atctttaatgagatgaagaagaaattctcgcagatcgagaatgctgctgacgagccacga
gttctgtgcatagtacaagataccactaactgcaagaccatcaatgaacgcatcactttg
aacctcccagcctccacctctgtgcgccagctcttccaggatgtggctggcaaagtgggc
tacgtgagcgcgaccttcagcttgaagtggggaaatgcagccggcacgggagacatgact
gagctggatcccagcccggatcagtctttactggatgccggctttgaggcgggcaagaag
aatttcctccatgtaacggataagaacggggagcagccgcagctaacatcggatgaatcg
ggcacagcggacagcagcggtgttgatgacagcgcacaggagaagttcatcggacctctt
cccagggacggctctgtgggctgcacgagcgactatgtcagtcagaactactcctattca
tcactgctcaacaaatcagacactggttacgtgggcttagtaaaccaggccatgacctgt
tacctgaacagcctgttgcagacactgtatatgaccccggaattccgcaatgcactctac
aagtgggagtttgaagatccagaagaggaccctgtaaacagcatcccctaccagctgcag
aggcttttcgtcctattacagaccagtaaaaaaagggcgatagaaacaacagacgtgacg
cggagtttcggctgggacagcagtgaagcctggcagcagcatgatgtgcaggagctctgt
agggtcatgtttgatgctctggagcagaagtggaagcagacggagcaggctgacctcatc
aatcagctgtatcagggcaagctgaaggattatgtccgatgcttggagtgcagttacgag
agctggcggattgacacgtttttggacatccctcttgtcatcaggccgtatggctccagc
acagcgtttggaagtgtggaagaagctctccatgcattcatccagccggagactcttgac
ggtcccaaccagtacttctgtgagcgctgtaagaagaagtgcgatgccaggaagggcctg
cgcttcctgcacttcccatatctgctaacactgcagctgaagaggtttgactttgattac
accagcatgcaccgaatcaagctgaacgatcggatgaccttccccgaggagctggacatg
agccctttcattgatgttgaagacgagaagtctcctcagactgagagctgcacggacagc
ggtgccgagaacgaaggaagctgtcacagtgaccagatgagcaatgacttctgcacggat
gatgccctggacgagggaatttgtctagagagtaacaacagtgtggaaaagctgaacaag
tcctcggagaagaactgcgtgtatgaacttttttccgtgatggtacattcaggcagtgcg
gcgggtgggcactactacgcctgcatcaggtccttctccgacgaccagtggtatagtttc
aacgaccagcatgtctgccgaataactcaagaggacattaagaaaacctatggagggtct
acaggaagccgaggatactactccagtgccttcgccagttctaccaacgcgtacatgctc
atgtatcggctgaagaatcctaccaaaaatgcaaaattcttggaggtgagcgaattcccg
gagcacatcaagcgtttgatgcagagagaaaaggagcaggaagaggaggagaagcgccag
cgagagatcgagcgcaatacttgtaaactgaagctcttctgcatgcatcctgtcaaacag
atccggatggagaacaagctggaggttcacaaggataagaccttgaaagaggccgtggag
attgcatggaagatcatggacttggaaggggtcgtccctctggattgctgtcggctagtg
aaatacgatgaattccacgattacctggaacgatcgtatgaagacgaagaagatcggccg
atgggtctgctgctgggtggggtcaagtcctcctacatgttcgatctgctactggaaact
aaacggccagaccaggtgttccagtcctacaaacctggcgaggtgatggtgaaggtgtac
gtggtggatctgaaggtagaggcggtcgccccaccagtcagcgtccgcgcttatctaagc
cagacaatccaggagttcaagcagctcatctccaagaccatagacttgccaccggatccg
atgcgcattgttctggaacgctgctacaatgacctacgactgctcagcgtgcccaataaa
acgctcaaggcggaaggattcttccgaagcaataaggtgtttgtcgagagctcggactcc
acggaccaccagctgccatttccggagtctcgcctgtggaagctcctcgaccgtcacgct
aacacaattagactgtacgtgtccctcccggagcatgtccccgtggcccagcgctcctcc
agcgcaaagtcttgcagagactgggaaaaccaggcggcgttctgcgagagggggaaaggc
ggcgggaaatccgtggacgctattttggaggaaagcactgaaaaactcaagtctctgtcc
ctccagcagcaggaggaagggggcaacggggacagcagtaaaagtacagagggcagcgac
tttgaaaacattgactctccgctgaacgaggcggattcctcagggtcggccgacaaccga
gaactggagaaccggattctccccgccgactctgagaacaacttccagtcggaagagcga
tcggactctgatattaataacgaccggagtactagttctgtggacagcgatatccttagc
tcaagccatagcagcgacaccctgtgcaacgcggacaatgcccccataccactagccaac
gggctcgactcccacagcatcaccagcagccgcagatccaaagccaacgaaggcaaaaag
gagacgtgggatacggccgaggaggattccgggacggacagcgagtacgacgagagcggg
aagcgccgaggggaggcccagtttgtgtatttcaaagcagaaatgcattctggggaggaa
ggatctggggaaggacaaaaatgtttattggtgaatgtagataaaagaatcaccctctct
gctttcaaacagcagctggagccttttgtgggggtcccctcctcccagtttaaagtcttc
cgggtttatgccagcaatcaggagtttgaaagcgtgcggctgaacgagacgctgtcctcc
ttctccgacgacaacaagatcaccatccggctgggaagggccctgaagaagggagaatac
agagtgaaagtgttccagctcctaataataaacgaccccgagccgtgtaagttcctgctg
gacgccgtcttcgccaaaggaatgagtgtgcgacagtccaaggaagagctgattcctcaa
ctcagggagcagtgtggcctggacctctccgtggacaggttccgcttaagaaaaaagact
tggaagaaccccggcacagtattcctcgattaccacgtctacgagaacgagatcagtatt
tcaagcaactgggaggtcttcctcgaggtcctagaagaaggggagaagatgaagtccatg
tcccagctgtccttgctgactaagaggtggaggccatcgcagctgaaactggaacctttc
caggagatcgtgctggagaccaacagtgtggatgaacttcgggagaagatgtgtgagatc
agcagcatactgatggagaatttagagtttgccaagggtcgagggacattcccctgtgac
atctctgtcctggagatccatcaagatttagactggaacccaaaagtatcaacactgaac
gcctggccgctgtatatctcagatgatggggcagtcatattctacagggataaaacggag
gaactggtggaattgacggacgagcagcgcaacgaactgatgaaaaaggaaagcagtcgg
ttgcaaaaaactggacaccgtgtgacttactccccccgcaaggaaaaagccctgaaaatc
tacctggacggagcttcgagtaaagacgccactcaagactga
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