Nanorana parkeri (Xizang Plateau frog): 108788692
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Entry
108788692 CDS
T04897
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108788692 (NRDE2)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108788692 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TPR_2
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
108788692
NCBI-ProteinID:
XP_018414025
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MALFPAFAASASTGPADDNKELNWLRNESFCTKDALSLHQRSLQAEPPSPACLSSPSPGR
QSSDSEDGSEAGRKKKKKKKKKKKHKELKRRKRDNDDDASDSASEKRKGPESCRSEEHEN
EASQKSAPGVRSIWLEEAQPAAEETFRIDKKADPANWEYKSLYRGDIARYRRKGRSCLGI
DPTRQLIVWEDAPGKKPSHKKPERYYSRSAVQALRIRAEHVACSKDNKDVASVGFIPVID
CNPDAPSASAARTSWVNPLGVYDDSTAMWLQGKGGLEDKTPPAAPRDTELLGRVEDYNRR
TRENPGDVRTWMEFVSFQDELLAQPSMYSTSEGEVDCYRMSVKLLLEKKLSILDRAIESN
PGSTELKLARLRLCAEFWEAPALLKEWQKLVFLHPNDPQLWQRYLLFSQSQFSTFSVSKV
MAAYGKCLTTLAAVHDGSMVSHPAVPGTERAMCEIFLQQCHFLRQAGHCEKAVSLFQALI
DFTFYKPDSVKDMTTKGQVEFFEPFWDSGEPRFGEKGAKGWSSWMRQQEKGGWVVVNNLG
EEEDDDVEEELDIKDKSLPRHKTWLDMECLREARHWLPWRPDPDKKQTEEDCEDPERQVL
FDDLGPSMFRITSPALKFQFIHSFLQFLGVPCGPRPSPACLYLALDELSLFDHRSASERL
LTSFELPLAGVGTVGHLETMSRWRRQIGHCKDGECFIQNVFQSALSLFHGEQKMELCVSW
LQYEISKVVQCIQAQRKKQLKSQGKRSKRLAKSLLKEPSNRNSLALWKEYALLEWLLGNT
EEARKVFDAAISLAGGKGLKDQALCSLCLLYAELEGAIIDPSEGGGRSRAVHVLTSLAES
SPYKPYSGPVQAIHILKARKTYARAVQDSLNLPPSASLVTLTGCYALFQYLTVGIDAAVA
VFREVTGSLPPPASVPGESQDSHGTLQAVAGMHINLLMHHTKVSVYPRTPLRDALSDALR
LYPDNITLWKSYIQTESRSHNISKARRFIDGVRRTSDALEPYLFAIRAEEDRKKLLESVQ
RADMGEVHTFMPETGLSNRIKALFEHCVSTERGSRCVLLWRMYLHFMVSLGRGDRGRGLF
YKAIQSCPWAKVLYMDAVEYFPEQLQEVADLMTEKELRVRLPLEELDLLLED
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggctctatttccagcttttgcagcgtctgccagtaccggtccggccgatgataacaaa
gagcttaactggctgagaaacgagagcttttgtacgaaggacgcactgtctctgcatcag
cggtcactgcaggctgagccgccctctcccgcctgtctgagcagtccctccccaggacgc
cagtcatccgacagtgaggatgggtcggaggctggtaggaaaaagaagaaaaaaaagaag
aaaaagaagaaacacaaagagctgaaaaggaggaagagggacaacgatgacgacgcatct
gattctgcctctgaaaaaagaaaagggccggagtcctgccggagtgaggagcacgagaat
gaggcctcccagaagtcagcccccggagtccgctcgatctggctggaggaagctcagcct
gcggcagaggagacgttcaggattgataagaaagctgacccagcaaactgggagtacaaa
tcgctgtaccgaggagacatagcgaggtacaggaggaaaggccgttcctgcttggggatt
gaccccacaagacagctcattgtatgggaggacgcccctgggaagaagccatctcataag
aaacctgagcgatattatagcaggagtgcagtacaggcgctcaggatccgggcagagcat
gtggcctgcagtaaggacaacaaggacgtggcatctgtcggcttcattcctgtgatagac
tgcaacccggatgccccctccgcctctgctgcccgcaccagctgggtgaatcctctgggt
gtctatgacgattccactgcaatgtggctacaaggaaaaggaggcctggaggacaagacc
ccgccggctgctcctagagacaccgagctgctggggagggtggaggattataatcggagg
acacgtgaaaaccccggagatgtgcggacgtggatggagtttgtctcatttcaggacgag
ttgttggcgcagcccagcatgtactccaccagcgagggagaggtggactgctatcgcatg
tctgtcaagctgctcctggagaagaagctttccattctggaccgagccatcgagagcaac
ccgggcagcacggagctgaagctggcgcggttgcggctgtgcgcggagttctgggaggcc
ccggccctgctgaaggagtggcagaagctggtcttcttgcatcccaacgacccgcagctg
tggcagagatacctgctcttctcccagagtcagttcagcaccttctccgtctccaaagtc
atggccgcctatggaaaatgtctcaccactctggccgcggtgcacgatggcagcatggtg
tctcacccggctgtgccgggcaccgaacgcgccatgtgcgagatcttcctccagcagtgt
cacttcctgcggcaggctggccactgtgagaaggcggtgtccttgttccaggcgctcatt
gacttcaccttctataagccggacagcgtgaaggacatgaccaccaaggggcaggtggaa
tttttcgagccgttttgggacagcggtgaacctcgattcggagaaaagggggcgaagggc
tggagctcatggatgcggcagcaggagaaaggaggctgggtggtcgtcaataacctaggg
gaggaggaagatgatgacgtggaggaagagcttgatataaaagacaagagtcttccccgt
cataagacctggctggacatggagtgtttgcgggaggctagacattggttaccatggcga
ccggacccggataagaagcagacggaggaagactgcgaggatcctgagagacaggtcctc
tttgatgacctcgggccatcgatgttcaggatcaccagcccggcattgaagttccagttc
atacattccttcctgcagttcctgggtgtcccctgtggccccaggccttctccggcctgt
ctgtacctcgccctggatgagctctccctcttcgaccacaggtcagccagtgagaggctg
ctgacttcatttgagctgcccctggccggagtcggtacagtcggtcaccttgaaacgatg
agcagatggaggcggcagataggacattgtaaggacggtgaatgcttcatacagaacgtc
ttccagtccgcactgtccttgttccacggagagcagaagatggaactgtgtgtcagctgg
ctgcagtatgaaatctccaaggtcgtccagtgtattcaagcacagaggaaaaagcagcta
aaatcccaggggaagcggagtaagagacttgccaaaagcctgctgaaagagccatcgaac
cgcaacagcctggcgctgtggaaggagtatgccctcctggagtggctgctggggaacaca
gaggaggccaggaaggtgtttgatgctgcaatcagtctggcaggtggcaaagggttaaag
gaccaagcactctgcagcctctgtttattgtatgccgaactagaaggggcgattatagac
ccttcggaggggggcggccggtctcgagcagtccatgtactcaccagcctggcagaaagt
tccccctacaaaccatacagtggacccgtccaggctattcatattttaaaagcgcgaaaa
acctacgcgcgcgctgtgcaggacagcttaaatttgccgccatctgcgtcgctggttacc
ttaactgggtgctatgcactttttcagtatctcaccgtgggcattgacgctgctgttgca
gtgttcagagaggtcactggctcactgccaccccctgcatctgtgcctggagaatcgcag
gactcgcatggcacactgcaggccgtcgcggggatgcacatcaacttgctcatgcatcat
actaaggttagcgtgtacccacggacgcctctcagggacgcattgtctgacgctttacgt
ctgtaccccgacaacatcaccctgtggaaatcctacatccagactgagagcaggtctcac
aatatcagcaaagccaggaggttcatcgacggggtcaggaggacgtcggatgccctggag
ccatatctgtttgccattcgggcagaggaggataggaagaagcttctggaatccgttcag
agggcggatatgggagaggtgcacacttttatgccagagacgggcctgtccaaccgaatc
aaggccttgtttgagcactgtgtgagcacggagcgtggatcccgctgtgtactactctgg
aggatgtacctgcacttcatggtttctctgggacgtggcgacaggggtcgaggtctcttc
tacaaggcgatacagagctgcccgtgggctaaggtgctatacatggacgccgtggagtac
ttccccgagcagttgcaggaagttgctgatctgatgacggagaaagagctgagagttcgc
cttcctctggaggagctggacttactattagaagattaa
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