Nanorana parkeri (Xizang Plateau frog): 108796414
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Entry
108796414 CDS
T04897
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108796414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108796414
03019 Messenger RNA biogenesis [BR:
npr03019
]
108796414
04121 Ubiquitin system [BR:
npr04121
]
108796414
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108796414
Transcription factors [BR:
npr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
108796414
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108796414
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108796414
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108796414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108796414
NCBI-ProteinID:
XP_018423389
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
VQAVIVPEFDLLQFIVQQSSEAAQRANLSCIAKSMLQTLKFFTSAFLFSSVDKSSESLSI
GNGDNLQQILTSDTPSPPPGLSKPNTTIPTSSANHSARSPFEDAMTESQSLFSDNFRHPN
PIPSGLPPFPSSPQTSSEWPTTPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGF
DPFDITRKALADLIEKELSVQDQPALSPNSIQNPHTTAKGPGSGFLHPTTVPNANSISST
FPVLPQRFPPFQHRAVYNSYSFPGQGARYPWMAFPRNNIMHLNHTANPTSNSNFMDLSHP
QHNTGLGGIPISDHSNSIESINMKEWQDGLRALLPNININFGGLPNASSPSNATHSAPTS
NTATTNSRNWDCPASWMDPAIITGIPSSTGNGLEPLQDDNPPHWLKSLQALTELDGPSSS
IPPHHPHNNLFSTQIPLHRANWSPYPPPTNPASFHSPPPGFQTAFRPPTKTPTDLLQSST
LDRH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtacaagcagtgattgtacctgaatttgacctcttgcaattcattgtacagcaaagctca
gaagcagcacaaagagccaatctgtcctgcattgcaaagagcatgctgcaaactttaaag
tttttcacgtctgctttccttttcagttctgtcgacaagtcatcagagtcattaagtata
ggaaatggcgataacttacaacagatattaacaagtgacaccccgtcgcctccgccaggt
ttatccaaacccaacacaaccatccccaccagttcagcaaatcacagtgcgcggtctccc
ttcgaagatgccatgacagaatcacagtctctgttctcggacaactttcggcacccaaat
cccatccccagtggacttcctcctttccccagttccccacagacatcaagcgaatggcct
acaactccagagccacagagcctctttacatcagaaacaatcccggtctcctcatctacg
gactggcaagctgcatttggctttggctcttctaaacagcaagaggacgacttgggcttt
gatccctttgatatcacccgcaaagccttagcagacttgattgagaaggaactgtctgtt
caagatcagccagcactgtcccccaactctattcagaatcctcacactactgccaaaggg
ccaggatctggtttcctccatcccaccacagtccccaacgccaactctatatctagcacc
tttcctgttttaccacagcggttcccaccctttcaacacagagctgtttataactcgtac
agtttcccaggccaaggagcacggtatccgtggatggcctttcctcgcaataacatcatg
cacttgaaccacacggcaaacccaacctcaaacagtaatttcatggacttgagccaccct
caacacaacacaggtctgggagggattcccatttcagaccacagcaattcaatagaaagt
ataaatatgaaggaatggcaggatggtcttagggccctcctgcccaacataaacatcaac
tttggtggtctccccaatgcttcttccccttccaacgccacccacagtgcaccaacgtcc
aacactgccacaaccaacagccggaactgggactgcccggccagctggatggatcccgct
atcattacaggcatcccgtcatccacaggaaatggtttagaacctctgcaagatgacaat
ccaccacactggttaaagtccctgcaagctctgacagagttggacggccccagtagcagt
atacctccccaccaccctcataacaacctcttcagcacacagatccccctacacagagca
aattggagcccataccctccccccacaaaccctgccagtttccactctccacccccaggt
tttcagaccgccttcagaccccctaccaaaacacctacagatctactacagagctccacc
ctggaccgtcattga
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