Nanorana parkeri (Xizang Plateau frog): 108801422
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Entry
108801422 CDS
T04897
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108801422 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108801422 (DDX46)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108801422 (DDX46)
Spliceosome [BR:
npr03041
]
Complex A
U2 snRNP components
U2 related factors
108801422 (DDX46)
Complex B
108801422 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
PMI_typeI_cat
Motif
Other DBs
NCBI-GeneID:
108801422
NCBI-ProteinID:
XP_018428817
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MGRESRHYRKRSSSRGRSGSRSKSRSPPDKRSKRDDRRSRSRERDRDRRRERSRSRDRRR
SRSRDRKRPGRRPSRERERSRERRRTRSRERRRSRSKSRSRRSRSASPSKIKKGEIRSKS
KENTDVLEASKEKKKDDEDKDKEKDVNNFDQNKLEEEMRKRKERVEKWREEQRKRVEETI
GELKREVEELKQGKKWSLEDDDDDEEEPAEGEKEGQEEESEEVDTLDAYMEEVKEEVKKF
NMGSVKGGSEKKSGPTVTKVVTVMTTKKAPAETTKKKGELMENDQDAMEYSSEEEEVDLQ
TALTGFQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTTEDVSAYRLLLEGITVQG
KNCPKPIKTWVQCGISMKILNALKKHLYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTI
AFLLPMFRHIMDHRPLEDGEGPIAVILTPTRELALQITKECKKFSKPLGLRVVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNFRRATYIVLDEADRMFDMGFEPQVM
RIIDNIRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEDK
KFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIIND
FKNGVCKLLVATSVAARGLDVKQLILVINYSCPNHYEDYVHRAGRTGRAGNKGYAFTFIT
EDQARYAGDIIKALELCGTAVPPELEKLWSEFKEQQKAEGKVIKKSSGFSGKGFKFDETE
QALANERKKLQKAALGLQDSDDEDAALDIDEQIETMFNSKKRVKDMAGPGVQGGAVGATG
ATAGSGGSSASANAGAPTAGNAEKLEMAKRLAKKLSVNKNLGAEAQDVMQQATNAILRGG
TIMAPIVSAKTIAEQLAEKINAKLNYVPVDKLEEEKQEAGANESFKRYEEELEINDFPQT
ARWKVTSKEALQRISEYSEAAITIRGTYFPPGKDPKEGERKIYLAIESASELAVQKAKAE
ITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggagtctcgacattaccgaaaacgctcatcatcacgtggccgctctggcagc
aggtcaaagagccgctcaccacctgataagagatccaaaagagatgaccgccgatccaga
agccgggagcgtgacagagatcgtagaagggaacgatcacgcagcagagatcgcagaaga
tcacgttccagagatagaaagcgtcctggccgccgaccaagcagagaaagggaacgtagc
agagagagaagaagaacccgcagtcgtgaaagaaggcgatccaggagcaaaagccgcagt
agacgatcacgctctgctagtccaagcaaaattaagaaaggggaaataagatcaaaatct
aaagagaacacagacgttcttgaagcaagtaaagaaaagaaaaaggatgatgaagataaa
gacaaagaaaaggatgtaaataattttgaccagaacaaacttgaggaagaaatgcgaaaa
cgtaaagaaagagttgagaaatggcgagaagaacagcgtaagagggttgaggagaccatt
ggagagttaaaaagagaagttgaagagctaaagcaagggaaaaagtggagcttagaagat
gatgatgatgatgaagaggagccagcagaaggagaaaaagaagggcaagaggaggaaagt
gaggaagtggatactttggatgcctacatggaagaagtcaaagaagaagtcaaaaagttt
aacatgggcagtgttaaaggtggaagtgaaaagaaaagtggaccaactgtcacaaaggtt
gtcactgtaatgaccacgaaaaaggctcctgctgaaacaacaaaaaaaaaaggagaactt
atggaaaacgatcaagatgccatggagtattcttcagaagaagaggaggtagacctccaa
actgctctgactggctttcagactaagcagcgcaaattgctggagcctgtggatcatggg
aagattgagtatgaacctttcaggaaaaacttttacgtggaagttccagagcttgccaaa
atgaccacagaagacgtcagtgcctacagacttcttttggaaggcattacagtgcaagga
aagaattgtccaaagccaatcaaaacctgggtgcagtgtggaatatctatgaagatttta
aatgcactgaaaaagcacttgtatgaaaaaccaactccaatccaggcacaagctattcct
gcaattatgtctggccgtgacctaatcggtattgccaaaaccggaagtggaaaaacaatt
gccttccttctgcccatgtttcgccatataatggatcatagacctcttgaagatggcgaa
gggccaatagctgttatattgactccaacaagagagcttgctttacaaatcacaaaagaa
tgcaaaaaattctccaagcctcttggactgagagtagtttgtgtgtatggtggaacaggc
atcagtgagcagattgctgaattaaaacgaggtgcagagataatagtttgtacaccaggt
cgcatgattgacatgctagctgcaaacaatggtcgagtaaccaatttccgacgggctact
tatattgttcttgatgaagcagaccgtatgtttgacatgggctttgaaccacaggttatg
agaatcattgacaatattcgaccagatcgtcaaactgttatgttctctgctacgtttcca
agggctatggaagctttagcaaggagaatactgagcaagccaatagaggtccaagttgga
ggaagaagcgtggtgtgttctgatgttgaacagcatgtgattgtaatagaggaagacaag
aagtttctgaaattactggagcttttggggcattaccaggaaaaaggatctgtcattatt
tttgttgataaacaggaacatgcagatggattactgaaagacttaatgagagcatcatat
ccctgcctatcacttcatggaggaattgatcaatatgaccgtgacagcataatcaatgac
tttaaaaatggtgtatgcaagctactggtagccacatctgtggcagctcgaggactggat
gtgaaacaattaatcttagtgattaactattcatgcccaaatcattatgaggattatgta
cacagagcgggacgtacaggacgagctggcaataagggctatgcatttacattcatcaca
gaagatcaggctcgctatgcaggtgatataatcaaggctttggagctttgtggaactgca
gttcctcctgaactggaaaagctttggtcagaattcaaagaacaacagaaagcggaaggt
aaagtaatcaaaaagtctagtggattctctggtaaaggatttaaatttgatgaaactgag
caagctttggccaatgagaggaaaaaactgcaaaaggctgcacttggtcttcaggattca
gatgatgaagacgctgcacttgatattgatgagcagattgagacaatgttcaattctaag
aagagagtgaaagacatggcagggccaggtgtacaaggaggagcagttggtgctacaggt
gccacagctggttctggaggatcttctgcttcagctaatgcaggtgcccctactgctgga
aatgcggagaagttggagatggcaaaacgcttggccaaaaagctcagtgtgaacaaaaac
cttggagcagaagcccaggatgtaatgcagcaggccaccaatgctattctcaggggagga
actattatggccccaattgtttctgcaaaaactattgcagagcagctggcagagaagatt
aatgcaaaacttaactatgtcccagttgacaaattggaagaggagaagcaggaagctggt
gcaaatgaatccttcaagcgatatgaagaagaattggagattaatgatttccctcagact
gccagatggaaagtcacatcaaaagaagcattacagaggataagtgaatattctgaggct
gccattaccattagaggaacatatttcccacctggcaaagaccccaaggagggagagaga
aagatttatttggccattgaaagtgcaagtgaattggctgttcaaaaagctaaagcagaa
attacccgtcttatcaaagaagagcttatcagattgcaaaattcttaccagccaacaaac
aaaggacgttacaaagtgctttaa
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integrated database retrieval system
