Neodiprion pinetum (white pine sawfly): 124214897
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Entry
124214897 CDS
T08966
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npt03041
]
124214897
Enzymes [BR:
npt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124214897
Spliceosome [BR:
npt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124214897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF6505
Motif
Other DBs
NCBI-GeneID:
124214897
NCBI-ProteinID:
XP_046473600
EnsemblRapid:
LOC124214897
LinkDB
All DBs
Position
3:22786893..22791095
Genome browser
AA seq
695 aa
AA seq
DB search
MYGNGYSNQTSYRPRTDREYGNRTGGGTYWNSQQQPHGDMGGLKQNQKKAPGDLLKKPNW
DLNSLQPIIKNLYVPHANVVSRSPDEVNKYHIGKEITVKGNNTPFPIQAFEEGNFPDYVM
EEIRKQGFKEPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYVLPATVHINNQPRLGRGE
GPIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPG
RLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEV
QALAEDFLSDYIQINIGSLTLAANHNIRQIIEICQEHEKETKLSSLLREIGADRGNKTII
FVETKKKVDDITKAIKREGWSAIAIHGDKSQPERDYVLSEFRNGKTAILVATDVAARGLD
VEDVKYVVNFDYPNSSEDYIHRIGRTGRCESAGTAYAYFTPNNARQAKELVSVLEEAGQP
INPQLSEMANSQRNQFGKGRQRWNTVRPTKDSSSGGPGSPRNIGSPNANNWQNNQQNGIQ
DRSTPRQQNGYQNNRQTNYHSNQNSYQPRQPNSYQNGYQNGNNAGGYQGNFHNQNGGTPR
YQGRGGYQGNRYNSRQNGFNGNQNGQGMYSMPPPFMMPPGSHTDAGIQSLVNNKFFQTNR
PPPGTNPCAYQSMGYGQFQPVSPYGYPYPPTPVQQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaacggatattccaatcaaacatcttacagacctaggacagacagagaatat
ggcaaccgcacaggtggaggcacatactggaacagccaacaacagcctcacggagacatg
ggcgggctcaagcaaaaccaaaagaaagcacctggtgatctcttgaagaaaccaaactgg
gacttgaactctctccaaccaataattaagaacttatatgtccctcatgcaaatgtcgtc
agccgttctccggacgaagtaaacaagtaccatattggaaaagaaatcactgtcaaggga
aacaacactcctttcccaatccaagccttcgaagaaggaaatttcccggactatgtgatg
gaggaaattagaaaacagggattcaaagaacctactgctatccagtcacaaggatggccc
attgctctcagcggtcgtgatatggtcggcatcgcccaaactggatccggcaaaactttg
gcttacgtgcttccggccactgtgcatatcaacaatcagccgcgactagggcgaggagag
ggacctatcgttctcatcttggcgccaaccagagaacttgcgcagcaaatccagagcgta
gctcgagactttggatcctcctcatgcattcgtaacacttgtatcttcggagggtcacca
aaaggaccacaggctcgagatctagagcgtggtgttgaaatttgcatagccacgcctgga
cgtctgattgattttcttgaaaagggtacaactaatctacgcagatgcacgtacttagtc
ctggatgaagcagacaggatgttagatatgggatttgaacctcagatcaggaaaattatc
gaacaaatcagacccgacagacaagttctgatgtggtcagctacctggcccaaagaagtt
caagctttggccgaagattttctcagtgattacattcagatcaatattggttccctgact
ttggctgccaaccataatatacgtcaaataattgaaatatgccaagagcatgagaaggaa
acaaagctctcttccctcttgagagagattggagcagaccgcggtaacaaaacgataata
tttgttgaaactaagaagaaggtggatgacataacaaaggcaataaaacgcgaaggatgg
tcagcaattgcaatacatggagataagtctcagccagaaagagattacgttctgtcagag
tttagaaatggaaagacggctatactggttgccactgatgtagctgcgcgaggactggac
gttgaggatgtaaaatatgtagtgaatttcgactacccaaatagttccgaggactacatc
cacaggataggcagaacagggcgttgcgaaagtgctggtacagcttatgcatatttcaca
ccaaacaacgcgagacaggctaaggaattggtctccgtcctagaagaggctggccaaccg
atcaatcctcaattatcagagatggcaaactcgcagagaaatcaatttggcaaaggccgt
caacgatggaacaccgtccgacccaccaaggacagtagcagcgggggtcccgggagccca
cgaaatattggcagtcccaacgcaaacaactggcaaaataatcagcagaatggtattcaa
gacaggtcgaccccgcggcaacagaatggctaccaaaacaatcggcaaacaaattatcac
agtaatcagaacagctatcaaccaaggcagccgaatagttatcaaaacggatatcagaat
ggtaataatgcaggtggataccaaggcaatttccacaatcagaatggaggtacacctagg
tatcaaggacgcggtggataccaagggaataggtacaacagtagacagaatgggttcaat
ggcaaccaaaatgggcagggcatgtactctatgcctcctccgttcatgatgccaccaggc
agtcatacagatgcaggcatccaaagcctggtaaacaacaagttcttccagaccaacagg
ccaccaccaggaactaacccgtgtgcttatcaatcaatgggttatggccagtttcaacca
gtctcaccatacggctacccttacccaccaaccccagtgcagcagtga
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