Neodiprion pinetum (white pine sawfly): 124219352
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Entry
124219352 CDS
T08966
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
npt
Neodiprion pinetum (white pine sawfly)
Pathway
npt03022
Basal transcription factors
npt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124219352
09124 Replication and repair
03420 Nucleotide excision repair
124219352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npt03021
]
124219352
03400 DNA repair and recombination proteins [BR:
npt03400
]
124219352
Transcription machinery [BR:
npt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124219352
DNA repair and recombination proteins [BR:
npt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124219352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
124219352
NCBI-ProteinID:
XP_046482744
EnsemblRapid:
LOC124219352
LinkDB
All DBs
Position
5:complement(8990492..8995719)
Genome browser
AA seq
402 aa
AA seq
DB search
MADEDDGKEYRWETGYEKTWEAIKEDDDGLLEGAVADIIQRAKRKRQSERHGGARLGMMR
HLYIVLDCSEAMSNQDLKPTRLRCSIKLLEDFIDEFFDQNPISQLGLIITRNKRAEKLSE
LAGNPKKHIKELKGLHLTALTGEPSIQNSLELALKSLKLLPSHASREILVLMGSLTTCDP
GDINTTIEILKSEGVRCSVIGLAAELHICKRLATATGGDHGVVLDDKHFKEQLSIHVDPP
AAATRLDSALVKMGFPHHALHSTTETPMTMCMCHVESSEEDSKLVTTGYLCPQCLSKHCE
LPVECRACGLTLVSAPHLARSYHHLFPVENYKEVTYEGSPSICYGCRRVLTQLDKKVYMC
GKCQQGFCLDCEIFIHETLHTCPGCATNPDTFQISSEKISIN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggatgacggaaaggaatatcggtgggaaacaggatatgagaaaacatgg
gaggcgatcaaggaagacgacgatggcttgttggaaggggcggtggcagacattattcaa
agagcgaagaggaaacgtcagtcggaaagacatggcggtgcaaggctgggaatgatgaga
catctttacattgttctagactgttccgaagctatgtctaatcaggatttgaaaccaacg
agattacgttgttctataaaacttttggaagatttcattgatgaattctttgatcaaaat
cctataagtcaactaggtttgataataacgagaaataaacgggctgagaaattgagcgaa
cttgccggaaacccaaagaaacacatcaaggaattgaagggcttgcatcttacagctctg
acgggtgaaccatcgattcaaaactctctagaactggcactaaaatccctgaaattgctg
ccgtcgcatgcaagtagggaaattcttgtgctgatgggttcgctaactacctgtgaccca
ggggatattaacactacgattgaaattttgaaatctgaaggagtgcgctgtagtgtgata
ggattagctgctgaattgcatatctgtaaacgtttggctaccgcgactggtggcgatcac
ggagttgttttggacgataagcatttcaaagaacaattgagcattcatgtagatccacca
gcagctgctaccagattagactcggctctggtgaagatgggtttccctcatcatgcattg
cattcaaccactgaaaccccaatgacgatgtgcatgtgccacgttgaaagttcagaagaa
gacagtaaacttgtgacgactggatacttatgtccacaatgtctgagtaaacattgcgaa
ttaccggtcgaatgtcgagcatgtggactgacccttgtatcagctccacatttggctcgt
tcttatcaccatttatttccggttgaaaactataaagaagtaacttacgaaggttctcct
tccatatgctacgggtgtagaagagtccttactcaattagacaagaaggtatacatgtgc
ggtaaatgccagcaaggcttttgtttggactgtgaaatttttattcacgaaacactccac
acctgtcctggatgtgcaacgaatcctgatacgtttcagatatcttcagagaagatttca
atcaattag
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integrated database retrieval system
