Neodiprion pinetum (white pine sawfly): 124220236
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Entry
124220236 CDS
T08966
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
npt00535
]
124220236
Proteoglycans [BR:
npt00535
]
Cell surface proteoglycans
Others
124220236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
124220236
NCBI-ProteinID:
XP_046484780
EnsemblRapid:
LOC124220236
LinkDB
All DBs
Position
5:24998106..25050704
Genome browser
AA seq
2399 aa
AA seq
DB search
MNVTAKNFLPASMRIGVRVSGNVSHNGKRIGATKMYVSLFRLLLGHPMSRASGDSSSSPC
EIKFTSQALRQGIPVTGSPSLPALSFYGASYIHLPVQEARGASDVSFKFRTHLPDAMLLL
AAGKTDYCLVKLVAGRLKVHINLGAGESEIASPRGLTLNDLSWHEVNLTRREANITLQID
VIHATRSVLPGRFFELNIHYGVYIGGQGDFNELFLGHTEYLRGCMADIHYNGANVVESAR
LRKGQSVATGVAWGCSTEFDASRDTEISFVEDGAFTAIPKPIPRTGTRWELDLKTVTESG
LLLYNAGQSLRADYLGVEIYERKIRLLMNTGNGPTELIHGTTVADGKWHHVIVEFDPNVI
GISVDSSAKTLALPKGSRYLDLAGTLYIGGTELNQRAKALGKGLKSGDVSYKGCIRKMLL
DNKPLGLPDVKVSQGIVVGCVWGFPCVEAEPCVDGASCSQLGVNSFKCSCDQALCIKPSY
AEDYKVYSSANLPVDLEILSLSPLMVSEGDHVLVTSQNIAMILDIAKYGVEETGVIFTLI
TPPSHGTLALDLLNTKSDHTFTLQEINQDKIQYMHDGSESTEDSMILELKLLAGASYTLP
GYLQGRLRFPLHVNVTPVNDPPLLEIPTAKVLRLAQGTRKVLSKELVWAVDADTPLQSLV
YTVLRGDMDAGHVERLTYPTKPIDSFSQAELQQGLIAYVHRGNAKSNAMLGLQVSDGIES
SQPAYLRVSAYPLQIKLQYNTGLVVVHRSFSHLTPANLSFITNSDDSSIEIRYDIVSPAQ
FGTIQKFKDVSGSWSNVDHFTSKDVELDWVRYLHNVGSPSQDEFKFQASVREVRTQHTFD
FRITFIDLELKESRRLPVNFTNSIEVVVGSQNLKFQTNPLTTPVNKIVFTIEESPKYGEL
FLTKKAVLKGDTFTQEDLDAGRLRYKLLRKSFSNINDEMVFRVKAPQCVEIASSLLIRYS
LQRNGNGPETVNRLRVNEGGSVPLKIMRFDGKNYGVTSLTYNVTVTPLHGWLKVVNDTFY
SNPRRNATYFTSSELAAELVHYVHDDTETPEDTFAYVAISSERENFMYVGNFHVEVAMRN
DNPPTRLNARVFHVVLNGERILTNKVLEYIDADLDTKPSDIVYSRRDAANGGLYKVTNPS
VQIYEFTQQDVNRHQILFRHHGEETGKVELGVTDGHFYTAGVLEVQASPPYVNPVPTNSA
VVKFNESTTLTTAVLQIETNVNANESEIIYTVIEKPRHGVLLKRDKETTTFTQDDLAHGE
VSYKHQGGSLTKDSFKFRVSAKKTEAEGHLTVKVYPESYWEPLIVANNQTVLVEEATSVL
LSKKHLEVMHPKISPGQITYLVKERPRFGNLELQSPDQEHSDEARDDYVVTSFEQSTINE
GKLHYVQSEPNQTQDSFTFDVTNGITWLRDLALNFVVIPDKMYLASGNLSVIEGKNVVLD
ESDFPVITEYYAGKVTDYRVIEKPKHGTLIDSTKNSLVKKFPQKHLAAGVIMYRHSDDET
LNDSLRLVAIAGEKTSEPFELGFKVIPVNDEIPFLVNKTTLNVWQGGSVFITSKNLATLD
NDTEPANLQYHVTSIRNGFISMKQFKKLEIRNFTQQHINNMEIMFTHTNESDAEFIFTIN
DGVHTTSNYTMLVVTREVRLSVKNNNPLNVFPLTRKPISADLLFIDSTDGNRKIKYIVRS
GPHLGRIIMETSEGIWLEVDRFYQSDLNHSKVIYEHTKQFMDLSANDSFVFDVEAHFAKP
VLNQLFQIEISVSSGGLDRYISAESVRVEEGGSGKVIVNVTGIVKFLQAKAGLENPTVIT
RLATHPSHGHVMLLPDLNVTTFTLPEIEGGKVAYFHDHSDTTEDHIHFSVYLTPGHILLC
NTTVPVIVTPINDEPFKLVTNAPFVSVVRNQNQTITRENLLTTDLDTDPQELSYDVISGP
TYGRLLLLPQDQNSSEVHQVNKFSQHDVDSNRLVYEHSGPLQAASFYFRVSDGRFNPVYR
VLNFHVLPIRLNVTVVGPVSLQQGSNVALISEDNIRLETNARQDLVTYNVTKAPKFGTIY
VRDAAAVSFRHTDLLSKSVMFMQTDMTVSNDSLELAAQLSDFEAKHVVIDVVVEPLMIVN
PMVAIAGERNRLDLRYMDATPLAKLTSSNPVFLVTRKPKYGRIKKIIRSSGDRKGTRERE
VSKFAHQELISGLIYVVCKKMPALEIEGTPDSFGFVLAASIFQPAAGNFNFRIKYNVDDF
NMTLGSPMDPVGHEGEMAIAPNMSNDYLLILGMLLGVFLLGVVVIITIRCRHNRYKHADD
NKTEPSPGVGVMPLPRPPDHLMPATPHLKRFGNDHDGITGSSTPLPVLPSMPATLPQCKV
IPLSPLDSIAGSEVDVSSRYPYGVPDGDEWSSFDTSDLPCPSATTPRANPLLRRNQYWV
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaccgcaaaaaacttcttacctgcgtcgatgagaatcggtgtgcgagtgtct
ggcaacgtcagccacaatgggaagagaattggtgcaaccaagatgtacgtcagccttttc
cgattgttgctcggccaccccatgtccagagcttctggtgactcgtcctcttcaccctgc
gagataaaattcacgagtcaggcactccggcaaggaattccggtaaccggttctccatcc
cttccagcattatcgttctatggagcgagttacattcacctcccggtccaggaagcgcgg
ggcgcatcggacgtcagtttcaaatttcgaacgcatttacccgacgcaatgttgctcctg
gccgctgggaagaccgactactgtttggtgaagctggttgccggtcgactgaaggttcac
atcaaccttggagctggcgagagtgagatagccagtccacgagggctcaccttgaacgac
ctcagctggcacgaggtgaacctgacgcggagggaggctaacatcaccctccagatagac
gtaatacacgcgacccggtcggtcctacccggccggtttttcgaactcaacattcactac
ggtgtctacattggagggcagggcgacttcaacgaactatttttaggccatacggagtac
ctaaggggttgcatggcggacatacactacaacggtgcgaacgtcgtggagtctgcaagg
ctgaggaagggtcagtcggtggcaacaggcgttgcctgggggtgttcaaccgagtttgac
gcgagccgagatacggagataagttttgttgaggatggagcattcacagcgattccgaaa
ccgatacctcggactggtacgagatgggaattggacttgaaaactgtcaccgagagcgga
ctgcttctctacaacgccgggcaatctcttcgcgccgattatctcggagtcgagatatac
gagagaaagatacgactgttgatgaacaccggaaacgggccgaccgaattgatacacggc
acgacagtggccgacgggaagtggcaccatgtaatcgtcgaattcgacccgaacgttatc
gggatcagcgtcgattcttcggcgaaaactctggcgctgcccaagggcagcaggtacctt
gatctagctggtaccttgtacatcggaggaacggaactcaatcagagagccaaggcactt
ggcaaagggctcaagtccggagacgttagttacaaggggtgtatcaggaagatgctactc
gacaacaaacccctcggacttccggacgtcaaggtcagccagggcatcgtcgtcggatgt
gtttggggattcccctgcgtcgaggccgaaccctgcgtcgatggcgcttcttgctcccag
cttggcgtcaactcgttcaagtgctcgtgtgaccaggcactgtgtattaaaccaagctat
gccgaggactacaaggtgtactcaagcgcaaaccttccagtggatttagaaattctatca
ttgagccctttgatggtatccgagggtgatcacgttctcgtaacaagtcagaacattgca
atgatcttagatatagcaaaatacggagttgaagaaacgggcgttatttttaccctgatc
acaccgccgtcgcacggaaccctggccctcgatcttctcaataccaaatccgaccatacc
ttcactctgcaagaaataaaccaagacaagatccagtacatgcacgacggcagcgagagt
acggaggacagcatgattcttgaactgaaactactcgctggtgccagctacactttgccc
ggttatttacagggtcgcctgagattcccactgcacgtaaacgtcacccccgttaacgat
cctccactcttggagattcctactgcaaaagtccttcgattggctcaaggaacaagaaaa
gtactcagcaaagaactagtgtgggctgtagacgccgacacgccacttcaaagccttgtt
tacactgttcttcgaggagacatggatgcaggacatgtggaacgtttgacttatccaaca
aaaccgatcgacagcttttctcaggcggaattgcaacagggactaatcgcctatgttcac
agaggaaatgcaaaatcgaacgcgatgctcggactccaggtgagcgacggtatcgagagc
agtcagccagcttatttgagagtctcagcgtacccactgcaaataaagcttcaatataat
acaggcttagtggtggtccatcggtcgttttctcatctgacgccggcgaatctatccttc
ataacaaactccgatgattccagtatcgaaatacggtacgacattgttagtccggcacag
tttgggacaatacaaaagttcaaggacgtctccggctcgtggagcaatgtcgatcacttc
accagcaaggatgttgagctggactgggtgcggtatcttcataacgtaggcagcccatct
caggatgagtttaagtttcaagcaagcgtaagggaggtcagaactcagcataccttcgac
ttcaggatcacgttcattgacctggaattgaaagagtccaggcgactgcccgtaaatttt
accaattccatcgaggttgttgtaggctcgcagaatctgaaatttcaaacgaaccccttg
accaccccagtcaataagatcgtattcaccattgaggaatcaccaaagtatggggaactg
tttttgactaaaaaagcagtgttgaaaggcgatacattcacccaggaagatctcgacgca
ggaagactaagatacaaactcctaaggaaatctttctccaacatcaacgatgagatggtg
ttcagagtgaaggcgccacagtgcgtggagatcgcgtcctcacttcttatcagatacagc
ctgcagagaaacggaaacggacctgaaacggtcaacagattaagggtgaacgagggaggc
agcgtaccattgaagataatgcgtttcgatggtaaaaattacggcgttacttcgctaact
tacaacgtaacggtcacccctttacacggctggctaaaggtcgtcaatgatacattttat
tcaaacccgagacgaaatgctacgtatttcacgtccagcgaactggccgccgagcttgta
cactatgttcatgatgatacggagactccggaggatacttttgcgtatgtggccatttcc
tcagagcgagagaacttcatgtacgtaggcaattttcacgttgaagtggcaatgagaaat
gacaatccgccaacacgactcaacgccagagtatttcacgttgttctcaacggcgaacga
attctcactaacaaagtactcgagtacattgacgctgatctcgatacgaaaccttcggac
atcgtctactcgaggcgggacgcggcaaacgggggactctacaaagtgaccaatccttcg
gtacaaatatacgaattcacgcagcaggacgttaaccggcatcaaatactcttcagacac
cacggcgaggagacgggaaaagtcgagttaggtgtcaccgacgggcatttctacaccgct
ggagtcctcgaggtccaggcgagcccgccgtatgttaatcctgtaccaaccaatagcgcg
gtggtcaaatttaacgaatcgacgactctgactacagcggtgcttcagattgagacaaac
gtgaatgccaatgagagcgagataatttacaccgtgatagagaaaccgagacacggtgtg
ttgctcaaacgcgacaaggagacaactacgttcactcaagatgatctagctcacggagaa
gttagctataaacaccaaggtggctccctgaccaaagatagcttcaagtttcgcgtttcc
gcaaaaaaaactgaggctgaaggccatcttaccgtcaaagtttacccggagagctattgg
gaaccactcatcgtcgccaacaatcaaacggttctcgtcgaggaagcgacgagtgttctg
ctgtctaagaaacacctggaagttatgcatccaaaaatatccccgggtcagataacatat
ctggttaaagaaagacctcgatttggaaatcttgaactccagtctcctgatcaggaacac
agcgacgaggctagggacgattacgttgtcaccagctttgagcaaagtactattaatgag
ggtaaactgcactatgtccagtcggaaccgaaccaaactcaggacagctttacgtttgac
gttacaaatgggataacgtggctccgagacctcgccctcaacttcgttgtcatccctgac
aagatgtaccttgcaagcgggaacttgagtgtcatcgagggaaagaacgtcgttttagac
gagtcagatttcccagtgataacggaatactatgcgggaaaggtgacggactacagagtt
attgaaaaaccaaagcacggtaccctgattgattctacgaaaaattctctggtgaagaag
tttccgcaaaaacaccttgctgctggtgtcataatgtatcgacattcggatgatgaaact
ctgaacgatagtcttagacttgtcgccattgccggtgaaaaaaccagcgaaccctttgag
cttggattcaaagtaattcccgttaacgacgaaattccgtttctggttaataagaccact
ttgaatgtatggcaaggtggctctgtctttataacgtccaagaatcttgctactcttgat
aatgatactgaaccggcaaatttacagtatcatgtaaccagcatcagaaatggatttatc
tcaatgaagcagtttaagaaattggaaattcgtaattttactcaacagcatatcaacaac
atggaaataatgttcacacatacgaacgaatcagatgctgaatttatcttcacgattaac
gatggggttcatactacaagtaactacacgatgctggttgtaacgcgagaagtccgtctc
tcggtgaaaaacaataatccattaaacgtgtttccattaacaaggaaaccgatatctgcg
gacctactatttattgatagtacagatggcaatcgtaaaataaaatacattgtcagaagc
gggccgcatctcgggaggataatcatggaaacgagcgaggggatatggctcgaggttgac
aggttttatcagagcgatttaaatcacagcaaagtaatttacgaacacaccaaacaattc
atggatctctctgccaacgactccttcgttttcgacgtagaggcacatttcgctaagccg
gtactgaatcagctctttcaaattgagatatctgtatcaagcggcggacttgacagatac
atatcagccgaaagcgttcgcgtcgaggagggaggttcgggaaaggtgatagtgaacgtt
accggcattgttaagtttctgcaggcaaaagctggccttgaaaatcccacggtaataacc
agacttgccacacatcctagccacggccacgttatgcttttaccagacttaaatgtgacg
acattcacactgcctgaaattgaaggaggaaaggtagcgtacttccatgatcactcggat
acgacggaagatcatattcacttctctgtgtacctgactccgggccacattctactgtgt
aacacgactgtcccagtaattgtaacgccgataaatgacgagcctttcaaactcgtaacc
aacgcgcctttcgtctctgttgtaagaaatcagaaccagacaataaccagagaaaacttg
cttacgaccgatctggacacagaccctcaggaactatcctacgacgttatatctggccca
acttacggcaggcttcttctgcttccccaagatcaaaattcatccgaagttcatcaggtg
aacaagttcagccagcacgatgttgactcaaatcgtctcgtctatgagcactccggcccg
ttacaagcggcttcgttttacttcagggtatccgatgggagattcaacccggtctacagg
gtattaaactttcacgttctcccaatccgtttgaacgtgactgtcgtcggccctgtcagc
ctccagcaaggctctaacgtagctctgatatcagaggacaacataagactagaaactaac
gcgaggcaggatttggtcacctacaatgtaacaaaggcaccgaagttcggcaccatatac
gtcagggacgctgcggcggttagcttcaggcacacggatcttctgtcgaagagtgtaatg
ttcatgcagaccgacatgaccgtgtcgaatgatagcctcgagctagcggcacagctgagc
gattttgaggcaaaacacgtcgtcatcgacgtcgttgtagaaccattgatgatcgtgaat
cccatggtggctatagcaggggagagaaatcggttggatctacgatacatggacgcgacg
ccactggcgaagctgacaagtagcaacccggtgttcctggtgacgaggaaaccgaagtat
ggacgaattaaaaagatcatcaggagttccggagataggaagggcacgcgggaacgagaa
gtgagcaagttcgcccatcaggagctgatttcgggcctgatatacgttgtatgtaaaaaa
atgcccgctctggaaatcgaagggacacccgacagcttcggctttgtgctggcagcatct
atatttcagcccgcggctggcaacttcaacttccgaatcaaatataacgtcgacgatttc
aatatgaccttaggtagtccgatggacccggttgggcacgagggagaaatggcaatagcc
ccgaacatgagcaacgactatctcctcatcctgggaatgctcttgggcgttttcctcctc
ggcgtagtcgtcataatcaccataaggtgtagacacaatcggtacaagcatgccgacgac
aataagaccgaaccatcacccggggttggtgtaatgccgctacctagaccacccgatcat
cttatgcccgccactccgcacctcaaacgattcggtaatgatcatgatggcattacggga
agtagtaccccacttccagtcctaccatccatgccagccactcttcctcaatgcaaggta
atccctcttagccctttggacagcatcgctggctccgaggtcgacgtctcttcgaggtat
ccttacggtgtgccggacggtgacgagtggagcagctttgacacttccgatctgccgtgt
ccctcggctaccacacctagggccaatccgttactcaggagaaaccagtactgggtatag
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integrated database retrieval system
