Nocardioides rotundus: K8W59_11360
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Entry
K8W59_11360 CDS
T07669
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nro
Nocardioides rotundus
Pathway
nro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8W59_11360 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nro03021
]
K8W59_11360 (rho)
03019 Messenger RNA biogenesis [BR:
nro03019
]
K8W59_11360 (rho)
Transcription machinery [BR:
nro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K8W59_11360 (rho)
Messenger RNA biogenesis [BR:
nro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K8W59_11360 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UAL31978
LinkDB
All DBs
Position
complement(2295385..2296983)
Genome browser
AA seq
532 aa
AA seq
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MLVADLRAMAGALGISGTAGMKKPQLVQAIRAVQNEHAASKTQDQPAQQGQRDRGQQGKK
DKPQQDKQQDKQQDKGQQGQQRQKSNQGGQQSKNKQQDRGQQDKQPDKAAQDKGQDKGQE
KLKDTQQDDGDEGSRRNRRRRGRDRNRSGLRNEPDTQILEDDVLVPAAGILDVLDNYAFV
RTSGYLAGAEDVYLSLSMVRKYGLRRGDAVVGQVRQPREGERREKFNPMVRIDSVNGAEP
DTARERVDFGDMTPLHPSERIRLETGADDVAGRVIDLVAPIGKGQRGLVISPARAGRTQV
LHSLAESISANHPECHLMVVLVDERPEEVTDYQRSVKGEVIASTFDRPAGDHTAIAELAI
DRARRLVELGHDVVVLVDGITRLGRAYNLTAPANGRTLAAGVDANALYHPKRFFGSARAL
EGGGSLTIIATATVDSGSPVDELIFEEIRDTANMELWLRSDAAEMGLFPAVDLARSGTRH
EDQLRAAAEVPVVRTLRRRAAGEDGAGQLEQLLDAVRQTSGNEALVARLPRG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgccgacctgcgtgcgatggcgggtgcgctgggcatctccggcaccgcgggc
atgaagaagccgcagctggtccaggcgatccgcgcggtccagaacgagcacgcggcctcg
aagacccaggaccagcccgcgcagcagggccagcgtgaccgcggccagcagggcaagaag
gacaagccccagcaggacaagcagcaggacaagcagcaggacaagggccagcagggccag
cagcggcagaagtccaaccagggcggccagcagagcaagaacaagcagcaggaccggggc
cagcaggacaagcagccggacaaggctgcgcaggacaaggggcaggacaagggccaggag
aagttaaaggacacccagcaggacgacggcgacgagggcagccgccgcaaccgccggcgc
cgcgggcgcgaccgcaaccgcagcgggctgcgcaacgagcccgacacccagatcctcgag
gacgacgtcctggtcccggccgcggggatcctcgatgtgctggacaactacgcgttcgtg
cgcaccagcggctacctggccggcgccgaggacgtctatctctccctgtccatggtccgc
aagtacggcctgcgccgcggcgacgccgtcgtgggccaggtgcggcagcctcgcgagggg
gagcggcgggagaagttcaacccgatggtccgcatcgacagcgtcaacggcgccgagccc
gacaccgcgcgtgagcgcgtcgacttcggcgacatgaccccgctgcacccgagcgagcgg
atccggctggagaccggagccgacgacgtcgccggccgggtcatcgacctggtcgcgccg
atcggcaagggccagcgcggcctggtgatctccccggcacgggccgggcggacccaggtc
ctgcactccctggcggagtcgatcagcgccaaccaccccgagtgccatctcatggtggtg
ctggtggacgagcggcccgaggaggtcaccgactaccagcgctcggtcaagggcgaggtg
atcgcctcgaccttcgaccggccggcgggggaccacacggcgatcgccgagctggcgatc
gaccgggcccggcgcctggtcgagctggggcacgacgtcgtggtgctggtcgacggcatc
acccgcctgggccgcgcctacaacctgaccgcgcccgccaacggccggacgctcgcggcc
ggtgtggacgccaacgcgctctaccacccgaagcggttcttcggcagcgcccgggcgctc
gagggcggtgggtcgctcaccatcatcgcgaccgccaccgtggacagcggctccccggtc
gacgagctgatcttcgaggagatccgcgacaccgcgaacatggagctctggctgcgcagc
gacgccgcggagatggggctcttcccggccgtcgacctggcccgctccggcacccgccac
gaggaccagctgcgggcggccgccgaggtcccggtggtccggacgctgcgtcgccgggct
gccggcgaggacggtgcggggcagctggagcagctgctcgacgccgtacgccagacctcc
gggaacgaggccctggtcgcccggcttccccgcggctga
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