KEGG   Natronomonas salina: HWV07_00530
Entry
HWV07_00530       CDS       T07280                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nsal  Natronomonas salina
Pathway
nsal03030  DNA replication
nsal03410  Base excision repair
nsal03420  Nucleotide excision repair
nsal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nsal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HWV07_00530
   03410 Base excision repair
    HWV07_00530
   03420 Nucleotide excision repair
    HWV07_00530
   03430 Mismatch repair
    HWV07_00530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsal03032]
    HWV07_00530
   03400 DNA repair and recombination proteins [BR:nsal03400]
    HWV07_00530
Enzymes [BR:nsal01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HWV07_00530
    6.5.1.6  DNA ligase (ATP or NAD+)
     HWV07_00530
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HWV07_00530
DNA replication proteins [BR:nsal03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HWV07_00530
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HWV07_00530
DNA repair and recombination proteins [BR:nsal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HWV07_00530
   NER (nucleotide excision repair)
    Other NER factors
     HWV07_00530
   MMR (mismatch excision repair)
    Other MMR factors
     HWV07_00530
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QLD87599
LinkDB
Position
complement(96683..98338)
AA seq 551 aa
MEFAEFAERAAEMEEEPADLETVGLVGELFADAGGDLDVVARFVQGRIFPAHDGTKLDIG
PSLCYEALARAAGPNVTADDVEDRLADVGEIGAVTEGLDLGGQQGLAAFGEDAGDDGLSV
SDVDSELRNLAAAEGSGSTDTKVDTLFGLFNRAEPLEARFLARLVLGEMRVGVGEGTVRD
AIGEAFDVPGAAVERALQVSNDCGLVAEIARDDGEAGLEEVHLDVGRPVKAMLAQAGTAV
DALEEWDEAAVETKYDGARVQVHYDGESARLFSRNLEDVTDPLPEVVEFVESELDVPAIL
DGEVVAVDDDGDPLPFQEILRRFRRKHDVAAAREDVAVELQAFDCLHADGEDLLDVPLVE
RHDRLTDLLSAGVSELVVTDDPDAIAAKEERALEAGHEGIMLKNPASAYTPGNRGKNWLK
RKPDVETLDLVVTGAEWGEGRRANLLGTFLLSARVTDGEGYETIGKVATGITDEELEDLH
ERLEPYVLSESGTEVDLEPAVVFEVGYEEIQRSPTYSSGYALRFPRFVTVREDKDPEDAD
SLERVERLADA
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggagttcgccgagttcgccgagcgggccgccgagatggaggaggagccggccgacctc
gagaccgtcgggctcgtgggtgagctcttcgctgacgccggcggcgacctcgacgtcgtc
gcgcggttcgtccagggccggatcttccccgcccacgacggcacgaagctcgacatcggg
ccgtcgctctgctacgaggcgctggccagggctgccggaccgaacgtcaccgcagacgac
gtcgaggaccgcctcgccgacgtcggggagatcggcgccgtcaccgagggactggacctc
ggcggccagcagggactcgcggccttcggcgaggacgccggcgacgacggactgtccgtc
tcggacgtggactcggagctccggaacctcgctgccgccgagggctccggcagcactgac
acgaaggtcgatacgctgttcgggctgttcaaccgcgcggagccgctcgaggcccgcttc
ctcgcgcggctcgtcctcggcgagatgcgcgtcggcgtcggcgaggggaccgtccgggac
gccatcggcgaggccttcgacgtcccgggcgcggccgtcgagcgggcgctgcaggtctcc
aacgactgcgggctcgtcgccgagatcgcccgcgacgacggcgaggcgggactcgaggag
gtccacctcgatgtcggtcgcccggtgaaggcgatgctggcgcaggccggcaccgccgtc
gacgccctcgaggagtgggacgaggccgccgtcgagaccaagtacgacggcgcccgggtg
caggtccactacgacggcgagtccgcgcggctgttctcccggaacctcgaggacgtcacc
gacccgctccccgaggtcgtcgagttcgtcgagtcggaactcgacgtccccgcaatcctc
gacggcgaggtcgtcgccgtcgacgacgatggcgaccccctgccgttccaggagatcctc
cggcgcttccgccggaagcacgacgtcgcggccgcccgcgaggacgtcgccgtggagttg
caggcgttcgactgcctccacgcagacggcgaggacctcctcgacgtccccctggtcgag
cgccacgacagactgaccgacctgctgtcggcgggcgtctcggaactcgtcgtcaccgac
gaccccgacgccatcgcggccaaggaggagcgcgcgctggaagccggccacgagggcatc
atgctcaagaaccccgcttcggcgtacacgccgggcaaccgcgggaagaactggctgaag
cggaagcccgacgtggagaccctcgacctcgtcgtcaccggcgccgagtggggcgaggga
cggcgcgccaacctcctgggcacgttcctcctgtcggcccgggtgaccgacggcgagggc
tacgaaaccatcgggaaggtcgcgacggggatcaccgacgaggaactcgaggacctccac
gagcgcctggagccgtacgtgctctccgagtccgggacggaggtcgacctcgagccggcg
gtggtcttcgaggtgggctacgaggagatacagcggtcgccgacgtactcgtcggggtac
gccctccggttcccccggttcgtgacggtccgggaggacaaggacccggaggacgccgac
tccctcgagcgggtcgagcgactggccgacgcctaa

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