Neotabrizicola shimadae: JO391_03435
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Entry
JO391_03435 CDS
T08148
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JO391_03435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_03435
Enzymes [BR:
nsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JO391_03435
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JO391_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
PriA_CRR
ResIII
Helicase_C
MarR_2
AAA_22
AAA_30
zf-CHY
ADD_ATRX
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QYZ70588
UniProt:
A0A8G1EDW4
LinkDB
All DBs
Position
complement(731658..733844)
Genome browser
AA seq
728 aa
AA seq
DB search
MADRTYATGDLVGVLTTEPLGRILDYRAPDGGCGDGDFVEVPLGPRKVLGVVWGPGRGDF
DPAKVRPVSRLLDARPMRAELRAFLTRAADYTLTPLPAMLRLATRAPGLFDPPAMRRILR
PGAGDPTRMTEARARVLDALAAFGGAPVTQAELCAEAGVTPGVIKGLVAQGAIREEEAPR
DLPYPPLDPAGGRLVGAQIPAADHLVAAVAQAGFSATLLKGVTGSGKTEVYLEAVAEAIR
AGRQALVLLPEIALTADFLTRVQARFGARPGEWHSGVTSTERRRLWKMAAEGGVQMVVGA
RSALFLPFQDLALIVVDEEHDTSYKQEEGVLYNARDMAVLRASITGCPVVLASATPSLET
WVNADQGRYHRIDLPARFGEAVLPDLRTIDMRAEKLDANRWISAPLAQAIQDRMAKGEQS
LLFLNRRGYAPVTLCRACGNQVGCDHCDARMVEHRFLKRLVCHQCGATKPIPQACPSCGA
EGRMAAVGPGVERLAEEVAARFPEARTAILSSDLFGSARALKEQIETIAEGGADIVIGTQ
IVAKGHNFPLLTLVGVIDADLGLQGSDLRAAERTFQLMRQVSGRAGRAEKPGLALLQTHQ
PEHPVIRAILGGEEDAFWRAEAAGRRAAGTPPFGRLAGIILSSPDLAQVFDTANDLARRS
EPLTRIGAQVFGPAPAPIARVRGRHRVRLLVKAERTTALQSALAEWVGQIRLPANLRLAI
DIDPQSFL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccggacctatgccacgggcgatctggtcggcgtgctgaccaccgagccgctt
ggccggatcctggattaccgcgcccccgatggcggctgcggcgacggcgatttcgtcgag
gtgccgcttggcccgcgcaaggtgctgggtgtggtctggggccccggccgcggcgatttc
gaccctgcgaaggtccgcccggtctcgcgcctcctcgacgcccggcccatgcgcgccgaa
ctccgcgccttcctcacccgcgccgccgactacacgctgacgccgctccccgccatgctg
cggctcgccacccgcgcccccggcctcttcgacccgcccgccatgcgccgcatcctgcgc
cctggtgcgggcgaccccacccgcatgacagaggcccgcgcccgcgtgctggatgcgctg
gcggccttcggcggcgccccggtcacgcaagcggagctttgcgccgaagccggcgtcacc
cccggcgtcatcaagggcctcgtggcgcagggcgccatccgcgaggaagaagccccccgc
gacctgccctacccgcccctcgaccccgccggcggccgcctcgtcggcgcgcaaatcccc
gccgccgaccacctggtcgccgccgtggcccaggccggcttttccgccacgctcctgaag
ggcgtcaccggctccggcaagaccgaggtctatctggaagccgtggccgaagcgatccgc
gccggccgccaggcccttgtcctcttgcccgaaatcgcgctcaccgccgatttcctcacc
cgcgtccaggcccgcttcggcgcccgccccggcgaatggcactcgggcgtcacctccacc
gaacgccgccgcctgtggaagatggcggccgagggcggcgtgcagatggtcgtcggcgcc
cgctccgccctgttcctgcccttccaggacctcgccctgatcgtcgtcgacgaagaacat
gacacctcctacaagcaggaggaaggcgttctctacaacgcccgcgacatggccgtcctg
cgcgcctccatcaccggctgccccgtcgtcctcgcttcagctaccccctcgctggagacc
tgggtcaatgccgaccagggccgctaccaccgcatcgacctgcccgcccgcttcggcgag
gcggtgctgcccgacctgcgcaccatcgacatgcgcgcagaaaaactggacgccaaccgc
tggatctccgcccccctcgcccaggccatccaggaccgcatggcaaagggcgaacagtcg
ctcctcttcctcaaccgccgcggctacgccccggtcacgctctgccgcgcctgcggcaac
caggtcggctgcgaccactgcgatgcccgcatggtcgaacaccgctttctcaaacgcctc
gtctgccaccagtgcggcgccacgaaacccatcccccaggcctgcccctcctgcggcgcc
gaaggccgaatggccgccgtcggccccggcgtcgaacgcctggccgaggaagtggccgcc
cgcttccccgaggcgcgcaccgccatcctctcctccgacctcttcggctcggcccgcgcg
ctgaaagagcagatcgagacgattgccgaaggcggcgccgatatcgttatcggcacccag
atcgtcgccaagggccacaacttcccgcttctcaccctcgtcggcgtcatcgacgccgat
ctcggcctgcaaggctccgacctgcgcgccgccgaacgcaccttccagctcatgcgccag
gtctcgggccgcgccggccgcgccgaaaagcccggcctcgcgcttctgcagacccaccag
ccagaacatcccgtgatccgcgccatcctgggcggcgaggaagatgccttctggcgtgct
gaggccgcaggccgccgcgccgccggcaccccgcccttcggccggctcgccggcatcatc
ctgtcctcgcccgacctcgcccaggtcttcgacacggcaaacgacctcgcccgccgctca
gaaccgctcacccgcatcggcgcccaggtcttcggccccgccccggcccccatcgcccgc
gtccgcggccgccaccgcgtgcggctcctggtcaaggccgaacgcaccaccgccctgcaa
tccgccctggccgaatgggtgggccagatccgcctgcccgccaacctgcggctcgccatc
gacatcgacccgcaaagtttcctgtga
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