Neotabrizicola shimadae: JO391_14910
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Entry
JO391_14910 CDS
T08148
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00521
Streptomycin biosynthesis
nsm00523
Polyketide sugar unit biosynthesis
nsm00541
O-Antigen nucleotide sugar biosynthesis
nsm01100
Metabolic pathways
nsm01110
Biosynthesis of secondary metabolites
nsm01250
Biosynthesis of nucleotide sugars
Module
nsm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JO391_14910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JO391_14910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JO391_14910 (rfbC)
Enzymes [BR:
nsm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JO391_14910 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QYZ69022
UniProt:
A0A8G0ZUG4
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All DBs
Position
complement(3060563..3061129)
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AA seq
188 aa
AA seq
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MKIEETSLPDVLILTPARFGDARGWFSETWNAERMRAVGLDLAFTQDNHSFSATQGTLRG
LHYQAPPRAQDKLVRCSRGAILDVAVDVRKGSPAYGRWTAVELTPENGRQLLVPKGFLHG
FVTLTPDTEVQYKCTDTYAPDCDGSVRWDDPDLGVDWGLSGDPVLSAKDLAAPLFRDWVS
PFVYEGKA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaagagacatcgcttcccgacgttctgatcctgaccccggctcggttcggc
gatgcccgcggctggttttcggaaacctggaacgccgagcggatgcgggcggttgggctg
gacctggccttcacccaggacaaccattccttttcggcgacccagggcacgctgcgcggg
ttgcattaccaggcgccgccgcgggcgcaggacaaactggtgcgctgttcgcgcggagcg
atcctggacgtcgccgtggatgtgcgtaagggatcgccggcctatggcagatggacggcc
gtggaactgacgcccgagaacggccggcagcttctggtgccgaaagggttcctgcatggt
ttcgtcaccctgacgcccgacaccgaagtgcagtacaagtgcactgacacctatgcgccc
gactgcgacggatcggtccgctgggacgacccggatctgggcgtggactggggtctgtcg
ggcgacccggtgctgtcggccaaggatctggcggcgcccctgttccgcgattgggtttct
ccgtttgtttacgaaggcaaggcatga
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