Niabella soli: NIASO_12405
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Entry
NIASO_12405 CDS
T03682
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nso
Niabella soli
Pathway
nso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIASO_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nso03021
]
NIASO_12405
Transcription machinery [BR:
nso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIASO_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
Sigma70_r2
HTH_24
HTH_23
HTH_Tnp_ISL3
HTH_38
HTH_Mga
HTH_11
HTH_20
TnsD
HTH_AsnC-type
HTH_5
MarR
DUF134
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AHF15736
UniProt:
W0F355
LinkDB
All DBs
Position
complement(2698946..2699512)
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AA seq
188 aa
AA seq
DB search
MVYNENEIIVLMRASDPKAFETLFRIHYQPLCLFANRFLNDLELSKETVSDVFSYLWEHR
TTIVISVSLKAYLHKIVQNKCLNIIKRKKIENRYVDYMLRTGLVNDNTYFDKITDAYYSK
QLGEEINGAINKLPERCREIFRLSRFEEMSYKEIAERLSISPKTVENQMGIALAKLKAAL
NKFLTFFF
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtgtataatgagaacgaaataatagtattaatgcgcgcatcagatccgaaggcattt
gagactttatttcgtatccactatcagccgctttgcttatttgccaatcgttttttgaat
gatctggagctatcgaaagaaactgtgtccgatgttttttcttatttatgggagcaccgg
acaactattgtgatcagcgtctcgttaaaagcgtatttacacaaaatagtccaaaacaaa
tgcctgaatatcatcaaaagaaaaaaaatcgagaaccggtatgttgattatatgttgcga
acaggccttgtgaacgacaatacctatttcgataagataacagatgcttattacagtaaa
cagcttggggaggagatcaatggagcgatcaacaagctgcccgaacgttgccgggaaata
ttccggctcagccgttttgaagaaatgagctacaaagaaatagcagaaaggctttccatc
agccccaaaacagttgaaaatcaaatgggcatagcgcttgccaaactaaaagcagcgctt
aataaatttttaacattttttttctga
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