Nocardia sputorum: IFM12276_65100
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Entry
IFM12276_65100 CDS
T09151
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nspu
Nocardia sputorum
Pathway
nspu00521
Streptomycin biosynthesis
nspu00523
Polyketide sugar unit biosynthesis
nspu00541
O-Antigen nucleotide sugar biosynthesis
nspu01100
Metabolic pathways
nspu01110
Biosynthesis of secondary metabolites
nspu01250
Biosynthesis of nucleotide sugars
Module
nspu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IFM12276_65100 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IFM12276_65100 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IFM12276_65100 (rfbC)
Enzymes [BR:
nspu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IFM12276_65100 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BDU03482
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Position
complement(7146339..7146902)
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AA seq
187 aa
AA seq
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MRIEQTDLVGVVVLVPAPVRDDRGLFTRTFDAAEFDSHLGIPGFSAGFVQDSQSRSHRGV
VRGMHGRSGRGEAKLVRCAHGAVHDVLVDIRPSSPTFGRTQAFRLDDEEFRHLYVPPGFL
HGFQALTDTADVCYRIDRPHDPAEDLSVAFDDPDLAIAWPLPVTAVSDRDANAGRWSHLR
AILSPAR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatcgagcagaccgacctggtcggcgtggtggtgctggtcccagcgcccgtccgg
gacgaccgtggcctgttcacccggaccttcgatgccgcggaattcgactcccatctggga
attccggggttctcggccggtttcgtgcaggactcgcagtcccggtcgcaccgcggggtg
gtgcgcggcatgcacggccggtccgggcgcggggaggccaaactggtccgctgcgcgcac
ggcgcggtgcatgacgtgctggtcgacatccggccgtcgtcgccgacgttcggccggacg
caggcgttccggctcgacgacgaggagttccggcacctgtacgtgccaccgggctttctg
cacggattccaagcactcaccgacaccgccgatgtgtgctaccgcatcgatcggccgcac
gatcccgccgaggatctcagcgtcgccttcgacgatccggacctggcgatcgcctggccg
ctgccggtgacggcggtgtcggatcgcgacgcgaacgccggacgatggagccatctgcgg
gctatcctgtcaccggcgcggtga
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