Notechis scutatus (mainland tiger snake): 113412583
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Entry
113412583 CDS
T09026
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113412583 (SOX6)
Transcription factors [BR:
nss03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113412583 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113412583
NCBI-ProteinID:
XP_026524121
Ensembl:
ENSNSUG00000018420
UniProt:
A0A6J1U047
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MDRKNILKSDFQTLEEKRMSSKQATSPFASDGEGTTTQDLASQEQEDDNNEELVTSHLPL
HTILHNKPHSEELPALVTTIQPDSDWNSVISTQHRMESENNKLCSLYSFRNTSTSPHKPE
ESGRDRNELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWK
EKMERLNTSELLGEIKGTPESLAEKERQLSAMITQLISLREQLLAAHDEQKKLAASQIEK
QRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHIPPLMIPIFPHDQRTLAAA
AAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGT
KMPSTPQPPNTTGTLSPTGMKNEKRGTSPVTQLKDDAAQPLNLSARPKTAEPVKSPTSPT
QSLFPTCKTSPVNVGNKSGIPSPIGATLGRGSSLDILSSLNSPALFGDQDTVMKAIQEAR
KMREQIQREQQQQQQQQPHIDGKLPTLNSMGLNNCRAEKERTRFENLGPQLSGKPSEDGK
LGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRSSSEPHIK
RPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHL
EKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPIATGTGVV
YPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYSMKTDSGSLAGNEMINGEDEME
MYEDFEEDPKSDYSSENEAHEAVAAN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaagaatattttaaaaagtgattttcagacccttgaagaaaaaagaatgtct
tccaagcaggccacctctccatttgcatctgatggagagggaacaacaacccaggactta
gcatcacaggagcaggaagacgacaacaatgaagaacttgtcacttcccatctgcctctg
cacaccatattgcacaacaaacctcactctgaagagctcccagctctagtcactacaatc
caaccagactcagactggaacagtgttatctcaactcagcataggatggagtcagaaaac
aataagttatgttccttatattccttccgaaatacttctacctcaccacataagcccgaa
gaaagtggtcgtgatcgcaatgagctaatgaccagtgttaattttggaactccagaacgc
cgcaaaggaagtcttgccgatgtggtggacaccttgaaacagaagaaactagaggagatg
acgagaactgaacaggaggattcatcttgcatggaaaaactactttctaaagactggaag
gagaaaatggagagattaaacacaagtgaactccttggagaaataaaaggtacccctgaa
agcttagcagaaaaagaacgacagctctctgccatgattacccagctcatcagtttacgg
gagcagcttctggctgcccatgacgagcagaaaaagctggcagcatcacaaattgaaaaa
cagcggcaacaaatggatcttgctcgccaacagcaagaacagattgcaagacaacagcag
caacttctgcagcagcaacacaaaatcaatctcctgcagcagcaaatccaggttcagggt
catattcctcctctcatgatcccaatttttccacacgaccagcggacattggcagcagct
gcagcagcccagcagggattccttttccccccaggaataacttataaacccggtgataac
tatcctgtgcagttcattccatcaacaatggcagctgctgctgcttctggactcagccct
ttacagctccagcaactctatgccgctcagttggccagcatgcaagtatcgcctggtacc
aagatgccttccacgcctcagccgccaaatacaacagggacgctctcaccaactgggatg
aaaaatgaaaagagagggaccagccctgtaactcaacttaaggatgatgctgcacagcca
ctgaatctctctgctagacccaagacagcagaacctgtcaaatccccgacgtcgccaacg
cagagcctcttccctacgtgtaaaaccagccctgtgaatgtgggcaataaaagtggaatc
cccagtcccattggcgcgactctgggaagaggatcttctctagacatcctttccagtctt
aactcacctgccctatttggggaccaggacactgtaatgaaagcaattcaggaggctcga
aagatgagagaacaaatccagcgggagcagcagcagcaacagcaacagcaaccacatatt
gatggaaagcttcccaccctgaatagtatgggcctaaacaactgtagggctgaaaaggaa
agaacacgctttgagaatttaggcccacagctatcagggaaacccagtgaagatggaaag
ctaggtccaggagttattgatcttacaaggccagaagatgcagagggaagtaaagcaatg
aatggctctgcagctaaactacagcagtattattgttggccaacaggaggtgctactgtg
gctgaagctcgagtctacagagatgcccggggacgaagtagcagtgagccgcacatcaaa
cgaccaatgaatgctttcatggtttgggcaaaggatgaacgcaggaaaattcttcaagct
tttcctgacatgcacaactccaacatcagcaaaattcttggttcccgctggaaatccatg
tcaaaccaagagaaacaaccttattatgaagagcaagcacgattaagtaaaatccaccta
gaaaaataccctaattacaaatataaacccagaccaaaacgcacttgcattgttgatggc
aaaaaactgcgcattggagaatataaacaactaatgaggtctcgacgacaggagatgagg
caattttttaccgtagggcaacagcctcagattccaattgccacaggaacaggagtggtc
tatcctggtgctattactatggcaacaactacgccatcgcctcagatgacatctgattgc
tccagcacttctgctagtcctgagcccagcatccctgtcattcagagcacttacagcatg
aagacggacagtgggagcctggctggaaatgaaatgataaatggggaagatgaaatggaa
atgtacgaggactttgaggaggaccccaaatcagactatagtagtgaaaacgaagcccac
gaggctgtcgctgccaactga
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