Notechis scutatus (mainland tiger snake): 113413795
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Entry
113413795 CDS
T09026
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113413795 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
113413795 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113413795 (THOC1)
03041 Spliceosome [BR:
nss03041
]
113413795 (THOC1)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113413795 (THOC1)
Spliceosome [BR:
nss03041
]
Complex C
Other components
EJC/TREX
113413795 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113413795 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
113413795
NCBI-ProteinID:
XP_026526095
Ensembl:
ENSNSUG00000019349
UniProt:
A0A6J1U6Y2
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MRQRWSLSGASMSPPTLFSLPEARLRFMNSTRDALKNKTIKPLLNAFSQIPGSENEKKLT
LDQAFRVALEEEIINKTSCENVLAIISLVINGVIEGICTASTPFVLLGDVLDCLPLDQCD
KIFTFVEKNVTTWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLS
EKSGLNLQSQFNLENITVFNTSEQDSTLGQKHAEEREEGMEVEEGEMGDDEAPTSCSIPI
DYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLTVFESYKLDDTQASRKKLEELK
TGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNFILTDEQS
LWIEATTKQVYQLLSENPPDGKRFSKMVEHILNTEENWNSWKNEGCPSFVKERQSDSKPV
RPFVRKRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEE
AIEQADPENMVDKEFKVVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKL
AKELPPPSEEIKTGEDEDEEDNDALLKENNESPDVRRDKLVTGEQIELFANRLGEYWKVL
APYLEMKDSDIRQIESDSEDLKMRAKQLLVTWQDQEGIHATMENLITALNKARLNDLSES
LSNDSENSS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcggtggagtctgtcaggagcaagtatgtcgccgccgacgcttttcagcttg
ccggaggcgcggttgcgtttcatgaactctactcgagatgcactcaaaaacaaaaccatt
aagcctttattgaatgcattcagccagatacctggaagtgaaaatgaaaaaaagttaaca
ttggatcaagctttccgagttgctctggaagaagaaattataaataaaacttcttgtgaa
aatgtcctggctatcatttcgcttgttattaatggggtaatagaaggtatttgtactgca
tcaactccttttgtgctcttgggagatgttttggattgccttcctttggatcagtgtgat
aaaattttcacctttgtggaaaaaaacgttaccacatggaaatcgaacacattttactct
gcgggaaagaattatttactgagaatgtgcaacgatcttttaagaagactgtcaaaatca
caaaatacagtgttttgtggaagaattcagctcttcttggccaggttatttcctctttca
gaaaagtcagggcttaacttgcaaagtcaatttaatttggaaaatatcacagtttttaat
accagtgagcaagacagcactcttggacagaagcatgcagaggagagagaagaaggaatg
gaagtagaagaaggtgaaatgggagatgatgaagctcctacaagttgttccattccaata
gattataatctgtacagaaaattttggtcacttcaagattacttcagaaatcctgtgcag
tgctatgaaaaggtctcatggaaaacatttcttaagtactcagaagaagtattaactgtc
tttgagagctacaagttggatgacactcaggcatcaagaaaaaaattagaagagctgaaa
actggaggagagcatgtttattttgcaaaatttcttacaagtgaaaagttaatggattta
cagttgagtgacagcaattttcgtcgtcatatcctattgcagtatttaatattatttcag
tatttaaagggacaggtgaagtttaaaagttcaaactttattctgactgatgaacagtcc
ctgtggattgaagctaccacaaaacaagtttaccagcttctatcagaaaacccacctgat
ggaaagagattctccaaaatggtagagcatatattaaacacagaagaaaattggaattca
tggaaaaatgagggctgtccaagctttgtgaaagaaagacagagtgattccaagccagtg
agaccttttgtgcgaaagagaccagcgcctgaagatttcttagggaaaggacctaacaaa
aaaattctaatgggaaatgaagaattaactcgcctctggaatttatgccctgataatatg
gaagcgtgtaaatctgagagtcgagaatatatgccaacattggaagagttttttgaagaa
gctatagaacaggcagatcctgaaaacatggttgataaagaatttaaggttgtgaataat
tctaactatggctggagagcattgagactattagcaagaagaagtcctcacttttttcag
ccaaccaatcaacagtttaaaagtttaccggaataccttgaaaacatggtcatcaaatta
gctaaagaattacctcctccttctgaagaaattaaaacaggcgaggatgaagatgaggaa
gataatgatgctttattaaaagaaaacaatgaaagtccagatgttcggcgagataagctt
gtaacaggagaacaaatagaattatttgctaacagacttggtgaatattggaaagtcctg
gctccatacttggaaatgaaagactctgatataaggcagattgaatcagatagtgaagat
ctgaagatgagagctaaacagttgcttgttacctggcaagatcaagaaggaatccacgct
actatggaaaatttgattactgcattgaacaaagctaggctgaatgacctttctgaaagc
ttatccaacgacagtgaaaacagtagctaa
DBGET
integrated database retrieval system
