Notechis scutatus (mainland tiger snake): 113416745
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Entry
113416745 CDS
T09026
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113416745 (UPF3B)
03015 mRNA surveillance pathway
113416745 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113416745 (UPF3B)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113416745 (UPF3B)
mRNA cycle factors
P-body specific factors
113416745 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
113416745
NCBI-ProteinID:
XP_026530578
Ensembl:
ENSNSUG00000010001
UniProt:
A0A6J1UQ12
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MKEDKENARPKEKRAGPLAPTGLRAAMAGADAKAGGEPDRLERPKDKKETLSKDETFFFK
VVIRRLPPSLTKEQLEEHLQPLPEHDYFEFFSNDSSLYPHMFSRAYINFKNQEDIVLFRD
RFDGYVFIDHKGLEYPAIVEFAPFQKAAKKKSKKKDAKAGTIDDDPEYKKFLESYSADDE
KLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEE
RRKWKEEERRKRKEAEKTKKVERCPEKERDKSKDEPKIKLLKKPEREERDFEKKEKAKRP
EKENLREDKTASPIGSVPAKRSDGEVKEEKTKKIVYPLQFEDECGKDYWEREYDRDRDYE
RIQRDKLRRQEEDRRRQKERFEKEKVFRRKEDDVKRERDSLREKGKRADFVEYVGNPEKT
EKGTKEDKRDDLAKKDRIRNKDRPAMQLYQPGARSRSRLSAYDESSPKPCDQGADKKPEG
EACNLKEEV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgccaggccgaaggagaagcgggcagggcccctcgctccc
accggcctccgagcagccatggccggggcggacgccaaggcgggcggggagcccgaccgc
ctcgagaggcccaaagacaagaaagagacgctcagtaaggatgaaacatttttctttaag
gtagtgattcgacgcctccctcccagcttgaccaaggaacagcttgaagaacatctccag
ccgctgccagaacacgattattttgaattcttttcaaatgactctagtttgtatcctcac
atgttttccagagcatacatcaactttaaaaaccaagaagacatagttctgttcagggat
cgctttgatggttatgtttttattgatcacaaaggtcttgaatatcccgccatcgtggaa
ttcgccccgtttcaaaaagcagccaaaaagaagagtaagaaaaaggatgccaaagctgga
accattgatgatgatccagaatataagaagtttttagaaagctacagtgctgatgatgaa
aaattaacatctacccccgagaccttattagaagaaatagaggcaagaaataaagaatta
atagccaaaaagacaactcctctgttgaacttcctgaagaataagcagaggcttagagaa
gagaaacgagaggaaaggaggaggcgggaactagagaggaaaagacaaagggaagaagaa
agaaggaagtggaaagaagaagaaagaagaaagcgaaaagaagctgaaaaaacaaaaaaa
gtagaaaggtgtccagagaaagaaagggacaaatcaaaggatgaaccaaagattaagcta
cttaagaagccggaaagggaggaaagagattttgaaaaaaaggaaaaagccaagagaccg
gagaaagagaatctgagggaggacaagaccgccagcccaatcggcagcgtgccagccaag
cgctctgatggcgaagttaaagaggaaaagacaaaaaaaattgtctacccattgcaattt
gaagacgagtgcgggaaagactactgggaaagagaatacgaccgcgatcgagactacgag
aggattcagcgggataaactccggcgccaggaggaagaccgccggcggcagaaagaacgc
ttcgagaaagagaaagttttccggaggaaagaggacgacgtgaaaagggaacgagactcc
ttgcgagaaaaagggaaaagagccgacttcgtggaatacgtgggcaacccagagaaaact
gagaaagggaccaaggaggacaaaagagacgatttggccaagaaagaccggattcggaac
aaggatcggcccgccatgcagctctaccagcccggagcccggagccgaagccgcctgtcc
gcgtacgacgaaagctctcccaagccatgcgaccaaggggcagataaaaagccggagggc
gaggcttgtaacttgaaagaagaggtgtga
DBGET
integrated database retrieval system
