Notechis scutatus (mainland tiger snake): 113419575
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Entry
113419575 CDS
T09026
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113419575 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nss03400
]
113419575 (LIG4)
Enzymes [BR:
nss01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113419575 (LIG4)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113419575 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
BRCT_2
DNA_ligase_IV
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
SSPI
Motif
Other DBs
NCBI-GeneID:
113419575
NCBI-ProteinID:
XP_026534825
UniProt:
A0A6J1UWP8
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MASVSTSHSSSKLTVASQVPFTDLCSTLERIQKSKSRSDKTKYFKDFLASWRNFHDALHK
NEKDVIDSFYPAMRLILPQLERERMAYGIKETVLAKLYIELLNLPKDGKDALKLLNFRTP
TGSQGNVGDFAMIAYFVLKSRCINQGQLTIQQVNDLLDSISNNNAAKRKDLVKKSLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTLFSVFHPDAAELHSVTTDLEKVCRQLHNPSISL
SDASISLFSAFKPMLASIASMGQIEKQMNNQAFYIETKLDGERMQMHKDGDVYKYFSRNG
YDYTQQFGASPLEGSLTPFIHQAFKNIQNCILDGEMMAYNPTTQTFMQKGSKFDIKRMVD
DSELQTCFCVFDVLMVNDQKLGHEMLSKRCHILNTIFTPMPGRVQIVSRIQANTQKEVVD
ALNEAIDNREEGIVIKNPRSIYKPDKRGEGWLKIKPEYISGLMDELDLLIIGGYWGKGLR
GGMMSHFLCAVAETPLPGEKPSKFHSICRVGSGCTMKELYDLGLKLASYWKKYDRKVPPC
SILCGVEKPQAYIDPCNSVIVQIKAAEIVSSDMYKTECTLRFPRIERIREDKEWYECMTL
DHLEQLRSKASGKLATKHLDIVEDEPQEKKRKTLAKIKKIGLMDHFKAPDLSKIHKVSNI
FEDVEFCIMTGTQNYSKCALESKIAEYGGSIVQNPGPDTYCVVAGTENVRVKNIISSNIY
DVVRAEWLLQCFQAGKFVPWHPGFMIHMSPETKQHFACEYDTYGDSFTADTDPLELKAVF
SRINTSEEISQDVIADIEARYSWESSLNMFRQQTIYLSLSDEMSNSRDRINQTRCLTVEL
ILRFHGAKVVSQLEEGVSHVISGDHSDLKKIKAIRRTFKKKFKIVSEQWIKDSVKAGALQ
NENLYIM
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtctccacttcacattcatcttccaagctaactgtagcatcacaagtccca
tttacggatctctgttcaacattagaacggatacagaagtccaaatctcgatcagataaa
acaaaatatttcaaggattttctagcttcctggaggaactttcatgatgctcttcataaa
aatgagaaggacgtgatagattctttttatcctgcaatgaggcttattcttccacaattg
gaaagagagaggatggcttatggcattaaagaaacagtgcttgctaagctctatattgaa
ttgctaaatttacccaaagatggaaaagatgctttaaaacttttaaattttcgaacaccc
actggctcacaaggaaatgttggagactttgctatgattgcctactttgttttgaaatca
agatgcatcaaccaaggtcaactgaccatacaacaagtaaacgatcttctagattctatt
tctaataataatgctgccaaaaggaaggatctagttaagaagagccttcttcagttaata
actcagagctcagcactagaacagaagtggttgatcaggatgatcataaaggatttgaaa
cttggtgtcagccagcaaaccttattttctgttttccatcctgatgctgcagaactacac
agtgtcacaacagatttggaaaaagtttgtaggcagctgcataatccttcgatatcactt
agtgatgcttctatttcattattttctgcctttaagccaatgcttgcttctattgccagt
atgggccaaattgagaaacaaatgaataatcaggctttttacatagagaccaaattagat
ggtgaacgaatgcagatgcacaaagatggagatgtttacaaatacttttccagaaatgga
tatgattatactcagcagtttggtgcttctcccctcgaaggttcattgactcctttcatt
catcaggcctttaaaaatattcaaaactgcattctggatggtgaaatgatggcctataat
cctaccacccagacttttatgcagaaaggaagcaagtttgacattaaaaggatggtggat
gattctgaattacaaacatgcttctgtgtatttgatgttcttatggtcaatgatcaaaag
ttgggtcatgagatgctgagcaaaagatgccatatattaaatacgatttttaccccaatg
cctggtcgagtacagattgtttctagaattcaagcaaacacacagaaagaagtagtggat
gccctaaacgaagccattgataacagagaagaaggaattgtaataaaaaaccccaggtca
atttacaagccagataagcgtggggaaggatggctgaagatcaagccagaatatatcagt
gggttgatggatgaactggaccttttaattattggaggctactggggcaaaggtcttcgt
ggtggcatgatgtctcattttttatgtgcggttgctgagactcctttgcctggtgaaaaa
ccatctaaattccattccatttgtcgtgttggttccggctgcactatgaaagaattgtat
gatcttggcttgaaattagcctcatattggaaaaaatatgataggaaggttcccccttgt
agtatcttatgtggtgttgaaaagcctcaagcctatattgatccttgtaattcagtgatt
gtccagattaaagctgctgagattgtgagtagtgatatgtataaaacagaatgcacatta
cgttttccacgcattgaaagaataagggaagataaagaatggtatgaatgtatgactctt
gatcatctggaacaactcagaagtaaagcttctgggaagcttgcaacaaaacaccttgat
atagttgaggatgaaccacaagaaaagaagcgtaaaactctggcaaaaattaaaaaaatt
ggtttaatggatcattttaaagcaccggatctttctaaaatacacaaagtttctaatatt
tttgaagatgttgagttttgtattatgactgggacacaaaattattcaaagtgtgccctg
gaaagcaaaatagcagaatatggtggcagcatagttcaaaatcctgggccggatacttac
tgtgttgtggcagggactgagaatgttagagtgaaaaatattatttcttccaacatttat
gatgttgtgagagcagaatggcttttacaatgtttccaagctggaaagtttgtgccatgg
caccctggttttatgattcacatgtctcctgaaacaaagcaacattttgcttgtgaatat
gatacttatggtgatagtttcacagctgatactgatccactagagttgaaggcagtgttc
tcaagaattaatacctctgaagagatttctcaggatgtgattgctgacatagaagcccga
tattcttgggaaagttccctaaatatgttcaggcaacaaaccatttacctgagcctttct
gatgaaatgagcaattcaagggacagaataaatcaaaccagatgtttaaccgtagagttg
atactacgctttcatggagcaaaagtagtatcacagcttgaggaaggtgtatcccatgta
atcagtggagatcattctgatttgaagaaaataaaagccatcagaaggacatttaagaaa
aagtttaaaattgtgtctgagcaatggataaaggattctgtaaaagctggagcattacaa
aatgaaaacttgtacataatgtaa
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