Nitrosomonas stercoris: Nstercoris_01931
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Entry
Nstercoris_01931 CDS
T06172
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
nst
Nitrosomonas stercoris
Pathway
nst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nstercoris_01931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nst03400
]
Nstercoris_01931
DNA repair and recombination proteins [BR:
nst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nstercoris_01931
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nstercoris_01931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
DALR_1
Motif
Other DBs
NCBI-ProteinID:
BBL35657
UniProt:
A0A4Y1YRM9
LinkDB
All DBs
Position
1:complement(1957235..1959349)
Genome browser
AA seq
704 aa
AA seq
DB search
MTIKPVIITFPDSPYKLNQAFQPAGDQPAAIHQLVEGITSGLSFQTLLGVTGSGKTFTIA
NMIAQLGRPAIVMAPNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIE
KDSSINEHIEQMRLSATKSLLEREDAIIVATVSCIYGIGDPVDYHGMILHVREHEKITQR
DIIQRLADMQYQRNEFEFTRGTFRVRGDVLDVFPAENSETALRIALFDDEVESMALFDPL
TGHTRQKVSRYTVYPSSHYVTPRHTTLRAIETIKTELAQHLKHLYENNKLVEAQRLEQRT
RFDLEMLNELGFCKGIENYSRHLSGRSPGDPPPTLIDYLPDNALMIIDESHVTVPQIGGM
YRGDRSRKENLVAYGFRLPSALDNRPLQFEEFEKLMPQTIFVSATPAEYEIQHSGQIVEQ
VVRPTGLVDPVIIIRPVATQVDDLMSEVSLRTQQGERTLVTTLTKRMAEDLTDYFSDHGI
RVRYLHSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVGILDADKEGFLRS
ERSLIQTMGRAARHVNGTVILYADRITGSMQRAIDETERRRTKQTQFNQKNNITPRGVHK
QIKDLIDGIYNIKDEAAQQKVAQVQARYAAMDETQLAKEIQRLEKAMLEAAKNMEFEQAA
DYRDEIKNLKCKLFIGVIDPAEIKITPQSISKKTNKKSKKRIRI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaaacctgtgattattacctttccagatagcccttacaagcttaatcaagca
tttcaacctgctggcgatcaacctgcagccattcatcaactagtagaaggcataacatct
ggcttatcgttccagactttgttaggtgtcactggttccggtaaaacttttaccatcgcc
aacatgattgcacaacttggccggcctgccatcgtcatggcccccaacaaaaccctggca
gctcagctttacgctgaaatgcgcgaattcttcccggaaaacgcagttgaatattttgtc
tcttactacgactactatcaacccgaagcatatgttccatcacgtgatttgttcattgaa
aaagattccagcatcaatgaacatattgagcaaatgcgtctttctgctactaagtcgctt
ctggaacgggaagatgccattattgtagcaactgtttcctgtatttatggtattggcgat
ccagttgattaccatggcatgattctccatgtgcgcgaacatgaaaaaattacgcaacgc
gatattattcaacgtttagcagatatgcaataccaacgcaatgaattcgaattcacgcgt
ggtacttttcgtgttcgcggcgatgtattggatgtttttccggcagaaaactctgaaacc
gccctgcgcattgccttatttgatgacgaagtagagagtatggcgctctttgatcccctc
actggccacactcgacaaaaagtatcgcgctataccgtttacccttccagccattatgta
accccacgccataccaccttgcgtgctattgaaaccattaaaacagaattggctcagcat
ctgaagcatctctacgaaaataataaactagtggaggcacaacgcctggaacaacgtacc
cgttttgatctggaaatgctcaatgaactagggttttgtaaaggcattgaaaactactcg
cgtcatctatctggccgttcacccggtgatccaccgccaacactaattgattatttacct
gataacgccttgatgattattgatgaaagtcatgtgactgttccccaaatcggaggtatg
tatcgtggtgatcgctccaggaaggaaaatttggtagcttatggttttcgactaccttcc
gcattggataatcggccgctccaattcgaagaatttgaaaaactgatgccgcaaactatt
ttcgtttcagccactccagcggaatatgaaatacagcatagtggccagatcgttgaacaa
gtggtgcgccctaccggcttggtggatccagttattattattcgcccagttgctacacaa
gtggacgatctcatgtctgaagtctcactgcgcacacaacagggagaacgaacgctggtg
acgactttgaccaaacgcatggcagaagatctgacagattacttttctgatcatggtatc
cgcgtacgctatttacattccgatattgataccgtggagcgcgtggaaatcattcgtgat
ttgcgcctgggaaaatttgacgtgctggttggtatcaaccttttgcgagaaggattagat
attccagaagtttcactggttggcatactagatgcggataaagaaggcttcttacgctca
gaacgatccctcatccaaaccatggggcgcgctgctcgtcatgtcaatgggaccgtgatt
ctctatgcagatcgaattactgggtcaatgcaacgcgccatcgatgaaactgagcgacga
cgcaccaaacaaacacaattcaatcaaaaaaacaacattacaccgcgtggtgtccataag
cagatcaaggacttgattgatggcatctacaatataaaagatgaagccgcacagcaaaaa
gtagcacaagttcaggcgcgctatgccgccatggatgaaacacaactggcaaaagaaatt
cagcgcttagagaaggcgatgttggaagcagccaaaaacatggaatttgaacaagccgct
gactatcgcgatgaaataaaaaatcttaaatgtaaactatttatcggtgtaatcgatcca
gctgaaatcaaaattacaccacaatccatcagcaaaaaaaccaataaaaaatctaaaaaa
cgtatccgcatttag
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