Neomonachus schauinslandi (Hawaiian monk seal): 110573796
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Entry
110573796 CDS
T08474
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110573796 (FREM1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
110573796
NCBI-ProteinID:
XP_021538091
EnsemblRapid:
ENSNSCG00000013777
UniProt:
A0A2Y9GG28
LinkDB
All DBs
Position
13:complement(40443578..40589531)
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AA seq
2177 aa
AA seq
DB search
MSAPTWGGPGALPLLLLLGWAGATFISLNRGLRLLKGSSAFLSGDDLKFAIPKEKDACRV
EVVMNEPMTQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDAVKLRLYRFTETDTFTET
FILRVYLLEPDCNIIHRSNNVLEVSEFYGLSRAIDKNLLRFDYERTAGLECTVRLDPVGS
RLPAHGQMVLLEPRPEKPRGDQPHSFFPESQLGTELRCPGGSCALGLKKMGSVNVSCEEF
LLMGLRYQHTDPPSPNIDYISIQLDLTDGRSKIVYKSESAWLPVYIRAGFPNQIPRAAFM
ATFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNVTKAPPQGYVTHLWDHTRPVSSFTW
KDLSDMQIAYQPPNSSYSARRHYEVEVEVYDFFFERSAPITVHISVRTADTNAPRVSWNT
GLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLQHGRLTLRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELEEGQTILI
QGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIYYRH
FGGEIFEDFFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVAY
ITKKHLHYIDTEYDRELLYTITTPPFFSFGHRHLDAGKLFMVDSIPKLTKNPAAPGLRSF
TQHAVNHMKVAYMPPMRDIGLHPGHVQFAFSISNQHGGTLHGICFNITVLPVDNQVPEVF
TNALRVTEGGQCVISTENILVSDVDTELDNICLSLQRVPQCGRVELDGFPLNTGGTFSWG
DLRALKVRYQHDGSERLQDDIFLEVTDGTNSAEFVLHVEVFPVNDEPPILKADLIPMMHC
SEGEEVVITSEYILATDVDSDDLKLMFVIAREPQHGVVRKAGVTVDQFSQGDVISGAVTY
KHTGGEIGLVPCFDTITLVVSDGEAGPSVNGCCYNGPHPSVPLHESFPVYDLNITVHPVD
NQSPSIAIGTMFVVDEGFSAAVTINHLSATDPDTAADDLEFVLASPPQFGYLENTLPSAG
FEKSNMGVSIGSFQWKDMKALHINYVQARHLRMEPTADQFMVYVTDGKRRSLEIPFYIII
NPTNDEAPDFVVQNITVCEGQMKELDSSIIKAADLDVPKDPLLFSITHKPRHGLLINGVL
SKDFPQNKQPVNPGQKHELVQNFSLELLKNGLKLMYVHDDSESLGDDFTVQLSDGKHKIL
RTISVEITPVNDEKPMLSKKAEITVKMGETRIISSAILSAIDEDSPRERIYYLFERLPQN
GQLQLKIGRNWIPLYPGMKCTQEEVDLNLLRYTHTGAMDSQDQDSFTFYLWDGDNRSPAF
DCHITIKDMGKGDTVILVKPLVVSKGDRGFLTTSTLLAVDGTDKPEELLYVITSPPRYGQ
VEYVRYPGVPITSFSQMDIAGHTVCYVHKSKAAVSRDTFRFLVSNGLQTKHGLFEITLET
VDRALPVVTRNRGLRLAEGATGLLSPDLLQLTDPDTPAEKLTFVLAQLPQHGHLYLRGTE
LLQHNFTQRDVDSRDVAYRHLGGDSRVDCFTFVATDGTNQGFVVAGRVGQEPVSFTIQVD
QLDKTAPYITHLNSPSQVGLLKNGCYGIYLTSHVLKASDPDTDDDLIIFKILRGPQHGHL
ENTTGEFIHEKFIQKDLNSKTILYIINPSLEVNSDIMEFQIMDPTGNSATPQILELKWSH
IEWSQTEYEVCENVGMLPLEITRRGYSMDSAFVSVKVNQVSATVGKDFILTPSKLIQFDP
GMSTKMWNIAITYDGLEEDDEAFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYSFN
PNKHNAQKKGIWHLLSPGSSSPTTSGSFHLERRPLTSNKWPAVTRGDTRQGFESPDLSRM
KLRTRGNGKTVLPSSVYRNGTDIIYNYHGTVSLTLEEDGSPSHQRKAKVSIIRQLPKTSR
EAELPQADKVESTTDSHFPRQDPLPSFPKTCTLELKGLFHFQESLRKLYECDGVTWKAWS
PQSEEVEGKSCPAGWHHHSGYCHSLITEQKASWNTAARACKEHHLGSLVTVLSRWHMRWL
WDISGGKPFWIGLNDRVRAGRWEWIGGEPVTFTNWRKGPPQRLKRGKNCVLAQRQGKWQT
QDCGKGKAHNYVCARKL
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgacctggggtgggcccggggctttgcccctgctgttgctcctaggctgg
gccggtgcgaccttcatcagccttaatcgtgggctcaggctgctgaagggcagctctgcc
tttctgtcgggagatgacctgaagtttgccatccctaaagaaaaagatgcttgcagagtg
gaagttgtgatgaacgagccaatgactcaaagggttgggaaactcaccccacaggtcttt
gactgccatttccttcccaatgaagtaaagtatattcacaatggttgcccgattcttgat
gaagatgcagtgaagcttagactgtacagatttactgagacagatacattcacggaaacc
tttatcctgcgggtctatctcttggaacccgactgtaacatcatccataggagtaacaat
gtcctggaggtgtctgaattctatggcttgtccagagccattgataagaacctgctcaga
tttgattacgagaggacagccggcctggagtgtacggtcaggctggatcctgtgggaagc
cggctgccagcccatggtcagatggtcctgctggagcctcggccagaaaaacctcgtgga
gatcagccacacagttttttccctgagtctcaactgggaacagagctgaggtgtccaggt
ggaagctgtgccctgggactgaagaaaatgggaagtgtcaacgtgagctgtgaggagttc
ttgctgatgggtcttcgttatcaacacacggatcccccttctcccaacattgactacatc
tcgatccagctggacctcacagatggcaggagcaaaattgtatacaagtcagagagtgcg
tggttgcccgtctatatcagagctggctttcctaatcagattccaagggccgcgttcatg
gccacgtttattctggaagtggatcagtttatcctgacctccttgactacatccgtcctg
gactgtgaagaggatgagacccctaagcccttgctggtgttcaacgttacaaaagcccca
ccccagggctacgtgactcatctgtgggaccacaccagacccgtctcctcgttcacctgg
aaagatctgagtgacatgcagatagcctaccagccaccgaacagcagctattctgcacgg
agacattacgaggtggaggtggaggtttatgatttcttcttcgaaaggagtgcacctatc
accgtccacatctccgtcagaacagcggatacaaatgccccccgagtgtcctggaacaca
ggtctgagtcttctagaggggcagtctcgggctatcacttgggaacagtttcagattgtc
gacaatgatgacatccatgctgtccagctggtcactgtgggcggcctgcagcatggacgg
cttacactaagaggcgggaaaggatttctcttcaccgtggctgaccttcaggctggagtt
gttcgctatcatcatgacgacagtgactccaccaaagacttcgtgatcttcaggatattc
gatggccatcacagcatccgccataagtttcccatcaacatcttgcccaaagatgacagt
cccccattcctcataagcaacgttgtgattgaactggaggaggggcagaccatactgatc
cagggttccatgctgagagcatcagacatggactccagtgatgactacatcttctttaat
atcacaaaacctcctcaggctggagagatcatgaagaagccagggccagggctgataggc
tatcctgtccctggcttccttcagagggatctatttaatggcatcatttactatcgtcac
tttggtggagagatctttgaagacttttttgaatttgtcctgtgggacagccatgaacct
ccaaatctctcagtgccacaggtggtgaccatccatatcactccagtggatgaccagctt
ccaaaagaggctcctggagtttctcggcatttggttgtcaaggaaactgaggtggcctac
ataactaagaaacatctacattatatagatacagaatatgacagggagcttctctacacg
ataacgacacctccatttttctctttcggccacagacatctggatgctgggaaattgttt
atggtcgatagcattccaaagctgaccaaaaatcctgcagccccggggctgagatcattc
actcagcatgctgtgaaccacatgaaagtggcctacatgccacccatgcgagatataggc
ctccatccgggacatgtccagtttgccttttccatcagtaaccaacatggtggcactttg
cacgggatctgctttaacattacagttcttccagtggacaatcaagttcctgaggtgttt
accaatgccctgagagtgactgagggaggtcaatgtgtcatcagcacagagaacattctg
gtttctgatgtggataccgaactggacaacatctgcctctccctacaaagagtgcctcag
tgtggaagggtggagctggatggatttcctctaaacacaggaggcacattttcttgggga
gacctccgtgccttaaaagttaggtatcagcatgatggatctgagagacttcaggatgac
atattcttggaggtcacagatggcacgaattcagcagaatttgttctacatgttgaggtg
ttccctgtaaatgatgagccaccaatcctaaaggctgacctcatccccatgatgcattgc
tcagagggcgaagaggtggtcatcacctctgaatacattttggctactgatgtggacagt
gatgacttgaagctgatgtttgtgattgctcgagagcctcagcatggcgtggtgaggaaa
gctggagtcacagtggatcagttctctcagggagatgtcatctcaggggctgtgacatac
aaacacacgggtggtgagattggcctggtgccttgttttgataccattacattggtggtt
tcggatggagaagctggcccttctgtgaatggctgttgctacaacgggcctcatccatct
gttcctcttcatgagtcctttccagtgtatgacctcaatatcacggtacatccagtggac
aaccaatcaccttcaattgcaataggtaccatgttcgtggtagatgagggtttctctgca
gccgttaccattaaccatttgtccgccactgatcctgacactgcagcagacgacttggaa
tttgttttggcttctcctccccagtttggctaccttgaaaacacgcttccttctgcaggt
tttgaaaaaagcaatatgggcgtaagcataggttcgttccagtggaaagacatgaaagca
ttgcatattaactatgtgcaggccaggcatctgaggatggaaccaacagctgaccagttc
atggtgtatgtcacagatgggaagcgacgctccttggagataccattttacattatcatc
aaccccacaaatgatgaagctcctgactttgtagtgcagaatattactgtgtgtgagggt
cagatgaaagaactggattcctccatcatcaaagctgctgatctagatgttcccaaggac
cctttgctgttcagcatcactcataaaccacgccatggcctcctcatcaatggggtgctt
agcaaagactttcctcaaaataagcagcctgtcaatcctggccagaagcatgaacttgtt
cagaacttttccttggaacttctcaagaatggactgaagttgatgtatgtgcatgatgac
tcagagagccttggtgatgactttacagtccagttgtcagatgggaaacataagatatta
agaacaatttcagtggagatcaccccggttaatgatgagaaaccaatgctgagcaagaag
gctgaaataacagtgaaaatgggtgaaactcgtattatttctagtgccattctttcagcc
atagatgaagactcacccagggagaggatttactatttgtttgaaaggcttccccaaaat
gggcagcttcaactcaagatagggaggaactggatccctctctaccctggcatgaaatgc
actcaggaggaagtggatctgaacttgctcagatacacacataccggggcgatggattcc
caggaccaagacagcttcaccttctatctctgggatggtgacaacagatcaccagcattt
gactgtcacatcaccatcaaggatatgggaaaaggtgatactgtcatcctcgtgaaaccg
ctggtggtgtctaaaggtgaccgaggtttcttgacgaccagcactctccttgctgtggat
ggaacagacaaacccgaggaactactctatgtcatcacctcccctccgcgctatggccag
gttgagtatgtccgctatcctggagtccccattacaagcttcagccaaatggacatagca
ggacacacagtctgctatgtacataagagcaaggcagctgtctcccgtgacaccttcaga
ttcctcgtcagcaatggcctgcagaccaaacacgggctgtttgagatcacactggagact
gtggacagagccttacctgtggtgaccaggaacagggggctgagactggccgaaggcgcc
acaggcctgctttcccctgacctcctccagctgaccgaccctgacaccccagcggagaag
ctcacctttgtgttggcccagctcccacagcacggccatctttacctgcgggggacagag
ctgcttcaacacaacttcactcagcgggatgtggacagcagggatgtggcctacaggcac
ctgggaggggactcccgggttgactgctttacctttgtggccacagatgggacaaaccaa
ggctttgttgtggctgggagagtgggccaagagcctgtgtcgttcaccatccaggttgac
cagttggacaaaacagccccctacatcacacacttgaattccccttctcaagtggggctc
ctgaaaaatggctgttacgggatttacctcacttcccacgtgttgaaggcatcagaccct
gacaccgatgatgatctgatcatctttaagattttacgaggcccccaacatggacatctg
gagaacacaacaggtgaatttatccatgagaaatttatccaaaaggacttaaacagtaag
accattctttatatcataaacccatctttggaagtgaattcagatatcatggaatttcaa
atcatggaccccacagggaactctgcaactcctcaaattttggaattgaagtggtctcat
attgaatggtcacagactgaatatgaggtctgcgagaatgtgggcatgttgcccttggaa
attaccagaaggggatattccatggactcagccttcgtgagtgtaaaggtcaaccaagtg
tcagctacagttggaaaagacttcattctgactccatctaaactgattcagtttgaccca
ggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagacgat
gaggcctttgaagtaattctgaactcccctgtgaatgcagttcttggcacaaagacaaaa
gctgcagtgaaaattctggactcaaaaggagggcagtgccatccttcatattccttcaac
cccaacaagcacaatgcacagaagaagggcatttggcacctgctgtccccagggtcttcc
tcacccaccacttctggttcctttcatctggaaagaagaccccttacatctaacaagtgg
ccggcagtcactaggggagacacccgacagggctttgagtctccagatctttctcgtatg
aagcttaggacccgggggaatggcaaaacggttcttccatcctctgtttatagaaatgga
accgacatcatctataattatcatggaacggtttccctgacgctggaggaggacggctct
ccatctcaccaacggaaggccaaagtatccattattcgtcagttaccaaagacaagcaga
gaggcagagctgcctcaggcagataaggtagaatccacaactgactcacacttccctaga
caggacccgctgccctcatttccaaagacctgcacactggaattaaagggacttttccac
ttccaagaaagcctccgaaagctgtacgagtgtgatggggttacgtggaaagcttggagc
ccccaaagcgaggaggtggaaggtaaatcctgcccagctggttggcaccatcactcaggc
tactgccactccctgatcacagagcagaaagcctcctggaacacagctgcccgagcttgc
aaggaacatcacctgggcagcctcgtaacagttctctctagatggcacatgcgatggctc
tgggacatcagtggagggaaacccttctggataggtttgaatgaccgagtgcgtgctggc
cgctgggagtggatcggcggggaacctgtcaccttcaccaactggaggaaagggccccct
caacgtttaaagcgtggcaagaactgcgttttggctcagagacaagggaaatggcaaaca
caggactgtgggaagggcaaggctcacaattacgtgtgcgccaggaaactctaa
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