Neomonachus schauinslandi (Hawaiian monk seal): 110579591
Help
Entry
110579591 CDS
T08474
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03250
Viral life cycle - HIV-1
nsu04623
Cytosolic DNA-sensing pathway
nsu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110579591 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110579591 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110579591 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110579591 (SAMHD1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110579591 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
110579591
NCBI-ProteinID:
XP_021544935
EnsemblRapid:
ENSNSCG00000009223
UniProt:
A0A2Y9H4P5
LinkDB
All DBs
Position
10:complement(116120111..116175551)
Genome browser
AA seq
627 aa
AA seq
DB search
MQGADSQQPFKRARWDGSPRTPPNIRSAAAETSPSPELRPNHQTWGPEQVCCFLKRSGFS
DPRLLDRFRENEITGLTLLHLNESDLESLGISTLGDRKKLHNYIQQLSEIHVDSMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLVR
ALREKQPELQISARDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPNVKWTHEQGSVMM
FEHLVNSNGLKEVMEYYGLIPEEDICFIKEQITGPLESPIKDSSWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFIKFARVCEVDNRKRICTRDKEVGNLY
DMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGAEGKKYHISTAIDDMEAFT
KLTDNIFLEILYSSDPKLDAAREILRKIEYRNLYKYVGETKPKGKTKIEREDYKRLPEEI
ANAKPSDVLLEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITKDQVSE
LLPERFEEQLIRVYCKKTDAKTLFVAQQHFVHWCLIRDFTKPQDGDVVAPLITPRKMEWN
NANSAQSPDHFQKESKSRQRLFPDDSV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagcggactcgcaacagcccttcaagcgagcccgatgggatggcagcccaaga
acgccaccaaacatccgttctgcggcggcggagacgtccccgagccccgaactccgccca
aatcaccagacctggggcccggagcaggtgtgctgcttcctaaagcgcagtggcttcagt
gatccccgactgctggaccgtttccgagaaaatgaaattacaggtttaacactactccat
cttaatgagtctgatcttgaaagtcttggaataagtaccttgggggacagaaagaagctg
cataattatatccaacaactgagtgaaattcacgttgattcaatgaaggtaattaatgat
cctatccatggccacattgaactccaccctctcctcatccgaatcatcgacacacctcaa
tttcagcggcttcgatatatcaaacagttgggaggcagttactacatttttccaggcgct
tcacacaatcgatttgagcacagtctaggtgtagggtatctagcaggatgtctggttcgt
gcactgcgtgagaaacaaccagagctgcagataagtgcacgagatgtgctctgtgttcag
attgctggcctttgtcatgatctcggtcatgggccattttctcatatgtttgatggaaga
tttattccacttgctcgcccaaatgtgaaatggacgcatgaacagggctcagtgatgatg
tttgagcacctagttaattctaatggactcaaagaagtcatggaatactatggtctcatc
cctgaagaagacatttgctttatcaaggaacaaattacaggaccacttgaatcaccaatc
aaagattcttcgtggccttataaagggcgtcctaaagagaaaagcttcctttatgagata
gtggccaataaaagaaatggcatcgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattaccagcgctttattaaattcgcccgtgtc
tgtgaagtagataataggaagcgtatttgtactagagataaggaggttgggaatctgtat
gacatgttccatactcgcaactctttgcaccgcagagcttatcaacacaaagttggcaac
atcattgatacgatgattacagatgctttcctcaaagcagacccctacatagagattaca
ggtgctgaaggaaaaaagtatcacatttctacagcaattgatgacatggaagccttcact
aagctaacagataacatttttctggagattttatattcttctgatccaaaactggatgca
gcacgagagattttaagaaaaatcgaataccgtaatctatacaagtatgtgggtgagact
aagccaaagggaaaaacaaaaattgaaagggaagactataaacgccttccagaggaaatt
gccaatgctaaacctagtgacgtattgctggaagctgaactgaaggctgaagatttaata
gtggatgttatcaacatggattatggaatggaagacaagaatcctattgatcatgttcgc
ttctattgtaagagtgacctcagcaaagcagtcatgataactaaagatcaggtttcagag
cttttgccagagagatttgaagagcagctaattcgcgtatactgcaagaagactgatgca
aagaccttgtttgttgcacaacaacattttgttcattggtgcttaatcagagacttcacc
aagcctcaggatggtgacgttgtagcccctcttataacacctcgaaaaatggagtggaat
aacgcaaattcagcccagagcccagatcacttccagaaagagtccaaatctagacagcgg
ctttttccggatgactcagtgtga
DBGET
integrated database retrieval system
